LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma19g00176	ATGTCTAAGGGTCCTGGTCTCTACTCTgacattggcaagaaagccagagATCTCCTGTTCAAGGACTACCACAGTGACCAGAAGTTTACCATCACTACCTACTCACCCACTGGAGTTGCTATAACATCCTCGGGGACCAAGAAAGGTGACCTTTTTGTGGCGGATGTTAACACCCAGTTGAAGAACAAGAACATCACCACTGATATCAAAGTGGACACCGGTTCCAATCTTTTCACAACTATCACTGTCAATGAGCCTGCTCCTGGTCTCAAGACTATTTTTAGCTTTAGAGTTCCTGATCAAAGGTCTGGAAAGGTGGAAGTCCAGTACTTGCATGACTATGCTGGAATAAGCACCAGTGTGGGTTTAACAGCAAACCCAATTGTCAACTTCTCCGGCGTTGTAGGAACTAATGTACTTGCCCTTGGTACTGATGTTTCTTTTGACACCAAGATTGGGGAGTTAACTAAATTCAATGCTGGATTGAACTTCACCAAAGATGATTTGGTTGCCTCATTGACTGTGAATAACAAAGGTGATTCCCTGAATGCTTCATACTACCATACAGTCAATCGCTTGACCAACACAGCTGTTGGTGCTGAGGTAACTCACCAATTCTCAACCAATGAGAACACCCTCACACTTGGCACCCAGCATGCATTGGATCCATTGACGACTGTGAAGGCTCGTGTCAACAACTTGGGCAAGGCAAATGCTCTCATCCAGCACGAGTGGCGTCCCAGATCGTTCTTCACCATTTCTGGGGAGGTTGACACTAAGGCCATTGAGAAGAGTGCAAAGGTTGGATTAGGTTTGGCCCTCAAACCCTAA	831	0.4452	MSKGPGLYSDIGKKARDLLFKDYHSDQKFTITTYSPTGVAITSSGTKKGDLFVADVNTQLKNKNITTDIKVDTGSNLFTTITVNEPAPGLKTIFSFRVPDQRSGKVEVQYLHDYAGISTSVGLTANPIVNFSGVVGTNVLALGTDVSFDTKIGELTKFNAGLNFTKDDLVASLTVNNKGDSLNASYYHTVNRLTNTAVGAEVTHQFSTNENTLTLGTQHALDPLTTVKARVNNLGKANALIQHEWRPRSFFTISGEVDTKAIEKSAKVGLGLALKP	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma19g00176	276	Pfam	Eukaryotic porin	4	269	IPR027246	GO:0005741\|GO:0055085
	Gma19g00176	276	PANTHER	PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN	1	276	-	-
	Gma19g00176	276	PANTHER	VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL	1	276	IPR001925	GO:0005741\|GO:0008308\|GO:0098656
	Gma19g00176	276	ProSitePatterns	Eukaryotic mitochondrial porin signature.	219	241	IPR001925	GO:0005741\|GO:0008308\|GO:0098656
	Gma19g00176	276	Gene3D	Porin	1	275	IPR023614	-
	Gma19g00176	276	CDD	Porin3_VDAC	5	275	IPR001925	GO:0005741\|GO:0008308\|GO:0098656

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma19g00176	Gma-Chr19	2130618	2133589	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma19g00176	K15040		-	gmx:100170756	546.969

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma19g00176	19	2130618	2133589	Gma06g01699	06	17100697	17102841	ECH
	Gma19g00176	19	2130618	2133589	Gma04g01687	04	45873540	45875471	ECH
	Gma19g00176	19	2130618	2133589	Gma05g00288	05	2593022	2594728	ECH
	Gma19g00176	19	2130618	2133589	Gma17g00914	17	7810606	7812396	ECH
	Gma19g00176	19	2130618	2133589	Gma19g00176	19	2130618	2133589	ECH
	Gma08g02788	08	43829237	43832369	Gma19g00176	19	2130618	2133589	ECH
	Gma18g01124	18	16366651	16369271	Gma19g00176	19	2130618	2133589	ECH