Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02788 ATGGTGAAAGGTCCAGGTCTCTACTCTGACATCGGCAAGAGAGCTCGCGATCTTCTGTTCAAGGATTATCAGAATGACCACAAGTTCACCATCACCACTTACACTTCCACTGGAGTGGAAATCACTTCAACTGGAGTCAGGAAAGGTGAAATATATTTGGCCGATGTCAGCACTAAGGTGAAGAACAAGAACATCACAACTGATGTCAAAGTGGACACTAACTCAAATCTGCGTACAACCATTACTGTGGATGAACCTGCACCTGGACTCAAGACAATTTTTAGCTTTAATTTTCCAGATCAGAAATCCGGCAAGGTGGAACTCCAGTACCAGCATGAGTATGCTGGAATCAACACCAGCATTGGATTGACAGCAAATCCTGTTGTTAACTTCTCTGGTGTGGTTGGAAATAATTTGGTTGCCGTTGGGACAGATCTTTCATTTGATACTGCCTCTGGCAACTTTACCAAATACAATGCAGGGCTGAACATTACTCATGCTGACCTTATTGCATCTCTAACTCTAAATGATAAAGGTGACAACCTTACTGCCTCATATTACCACATTGTAAACCCGCTGACTAACACGGCTGTTGGTGCGGAGCTTTCACATAGCTTTTCTGGCAATGAAAATATACTCACCTTTGGTACACAGCATGCTCTGGATCCACTAACTCTGTTGAAGTCCCGGGTGAACAACTATGGTCGGGCAAGTGCTCTGATCCAGCATGACTGGACTCCGAGAACTCGTTTCTCTCTTGTTGGTGAGGTGGATACCGGTGCCATTGAAAAGAGTGCAAAGGTTGGTCTTGCTGTGGCCTTGAAACCATAG 831 0.4477 MVKGPGLYSDIGKRARDLLFKDYQNDHKFTITTYTSTGVEITSTGVRKGEIYLADVSTKVKNKNITTDVKVDTNSNLRTTITVDEPAPGLKTIFSFNFPDQKSGKVELQYQHEYAGINTSIGLTANPVVNFSGVVGNNLVAVGTDLSFDTASGNFTKYNAGLNITHADLIASLTLNDKGDNLTASYYHIVNPLTNTAVGAELSHSFSGNENILTFGTQHALDPLTLLKSRVNNYGRASALIQHDWTPRTRFSLVGEVDTGAIEKSAKVGLAVALKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02788 276 Gene3D Porin 1 275 IPR023614 -
Gma08g02788 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
Gma08g02788 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Gma08g02788 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Gma08g02788 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02788 Gma-Chr8 43829237 43832369 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02788 K15040 - gmx:100787662 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02788 08 43829237 43832369 Gma08g02788 08 43829237 43832369 ECH
Gma08g02788 08 43829237 43832369 Gma06g01699 06 17100697 17102841 ECH
Gma08g02788 08 43829237 43832369 Gma04g01687 04 45873540 45875471 ECH
Gma08g02788 08 43829237 43832369 Gma05g00288 05 2593022 2594728 ECH
Gma08g02788 08 43829237 43832369 Gma17g00914 17 7810606 7812396 ECH
Gma08g02788 08 43829237 43832369 Gma19g00176 19 2130618 2133589 ECH