Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00288 ATGAGCACCTGTCCGGGGATATATTTTGATATTGGCAAGAAGGCTAAAGATGTTCTTCACAAGGACTATTCAAATCTATCTCCAATTCACTTTCACTACCAATTCATGGACTATAATGTAGACCTCTCTTGTAAAGTAGATGAACTTGTACCTGGATTCAAGAGCCTTTTCAAATGCACCATACCTGATTCTGGGAAGGTGGAACTACAGCACTTGAGCAACTACACTGGGATTACTGGATGCATTGGATTAGAAGGAAACCTAGAAAAAGGATATGACCCTGTTCTAAACTTATCAGGTCTTGTAGGAACAAACATTCTGTCTCTTGGAGGCAATGTTGCTCTTGACCTACCAACAAGAACAATCAGCAAGCTGAATGCTGGCTTAGGCCTCAACACTGACTTCCTTGTTGCTTCCTTGACCATGCATGACAGCTTTGACATTGTGAAAGCCTCCTGTTATCATGAAGTGAACCCCCTAACCAAGACTGCCATTGCAGCAGAGCTGAATCATAGCTTGTCAATGGGGGAGACTAGTGCCACAGTTGGTGCTCAGCATGCATTTTTACCGCAAACGTTGGTAAAGGCTCGATTTGACACCTTTGGCAGGGCAGGTGCTCTTATTCAACAAGGGTTCTGGGAGAGATGTTTTGTAACTATGGCTGGAGAAGTGGAGTTTAATACCTCGGATAATAATTTGCATCCCAAGGTTGGAGTCTCTGTGGCTTTAAAACCCTAG 738 0.435 MSTCPGIYFDIGKKAKDVLHKDYSNLSPIHFHYQFMDYNVDLSCKVDELVPGFKSLFKCTIPDSGKVELQHLSNYTGITGCIGLEGNLEKGYDPVLNLSGLVGTNILSLGGNVALDLPTRTISKLNAGLGLNTDFLVASLTMHDSFDIVKASCYHEVNPLTKTAIAAELNHSLSMGETSATVGAQHAFLPQTLVKARFDTFGRAGALIQQGFWERCFVTMAGEVEFNTSDNNLHPKVGVSVALKP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00288 245 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 245 IPR001925 GO:0005741|GO:0008308|GO:0098656
Gma05g00288 245 Pfam Eukaryotic porin 37 238 IPR027246 GO:0005741|GO:0055085
Gma05g00288 245 Gene3D Porin 2 244 IPR023614 -
Gma05g00288 245 CDD Porin3_VDAC 5 244 IPR001925 GO:0005741|GO:0008308|GO:0098656
Gma05g00288 245 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00288 Gma-Chr5 2593022 2594728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00288 K15040 - gmx:100787061 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00288 05 2593022 2594728 Gma17g00914 17 7810606 7812396 ECH
Gma19g00176 19 2130618 2133589 Gma05g00288 05 2593022 2594728 ECH
Gma08g02788 08 43829237 43832369 Gma05g00288 05 2593022 2594728 ECH
Gma18g01124 18 16366651 16369271 Gma05g00288 05 2593022 2594728 ECH
Gma05g00288 05 2593022 2594728 Gma05g00288 05 2593022 2594728 ECH
Gma17g00914 17 7810606 7812396 Gma05g00288 05 2593022 2594728 GST