Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g02164 ATGTCTTCCCCAAGCAAGCGCCGAGAGATGGACTTGATGAAACTGATGATGAGTGATTACAAGGTGGAGATGATTAATGATGGAATGCAAGAATTTTATGTGCAATTTCATGGACCCAATGACAGTCCTTATCATGGTGGTGTGTGGAAAGTAAGAGTTGAGTTGCCGGATGCTTATCCTTACAAATCTCCTTCCATTGGCTTTATCAACAAGATCTATCACCCAAATGTTGATGAGATGTCAGGATCAGTTTGTCTGGATGTTATCAATCAAACCTGGAGTCCCATGTTTGATCTTGTTAATGTGTTTGAGGTGTTTCTACCTCAACTTCTGCTGTATCCCAATCCATCAGACCCCTTGAATGGAGAAGCTGCAGCTTTAATGATGCGTGATCGACCAAGTTATGAACAAAGGGTTAAAGGTCTTATCTGCTGA 435 0.4161 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVQFHGPNDSPYHGGVWKVRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRPSYEQRVKGLIC 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g02164 144 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 142 - -
Gma18g02164 144 SUPERFAMILY UBC-like 4 141 IPR016135 -
Gma18g02164 144 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 4-RELATED 3 142 - -
Gma18g02164 144 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Gma18g02164 144 Pfam Ubiquitin-conjugating enzyme 10 140 IPR000608 -
Gma18g02164 144 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 144 IPR000608 -
Gma18g02164 144 SMART ubc_7 4 144 - -
Gma18g02164 144 CDD UBCc 7 140 IPR000608 -
Gma18g02164 144 Gene3D Ubiquitin Conjugating Enzyme 1 143 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g02164 Gma-Chr18 55351852 55354735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g02164 3 142 Miscellaneous Gene Families AT3G17000 23.649 4.28e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g02164 K10576 - gmx:100812138 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02164 18 55351852 55354735 Gma18g02164 18 55351852 55354735 ECH
Gma18g02164 18 55351852 55354735 Gma09g02359 09 48964006 48967687 GST
Gma18g02164 18 55351852 55354735 Gma07g00635 07 6526719 6529223 PCT
Gma18g02164 18 55351852 55354735 Gma16g00317 16 3338630 3341630 PCT
Gma07g00635 07 6526719 6529223 Gma18g02164 18 55351852 55354735 PCT
Gma16g00317 16 3338630 3341630 Gma18g02164 18 55351852 55354735 PCT