Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01998 ATGGAGAGAAGGGTTGGCTATGAGGTGCTGGTGGCTTTGGTGACCCTTTTGGTTTTCTCATTTGCTTGTGCCACTGCTTCATCATCAGGACCAACAAAACTCCACCACCGTGTGGAGCAATTCAGGAGGAATCTGCTTGCTAATGGCCTTGGTAGAACTCCTCCAATGGGGTGGAACAGTTGGAATCATTTCAGCTGTCAAATTAACGAAAAAATGATCAGAGAAACTGCTGATGCCCTTGTTTCTACTGGTCTGTCCAAGCTTGGATACACTTATGTCAATATAGATGATTGTTGGGCTGAATTAAATCGGGATGCTAAGGGTAATCTGGTAGCAAAAAATTCAACGTTTCCTTCTGGAATCAAAGCTCTTGCAGATTATGTTCACGGCAAGGGTCTTAAGCTTGGAATTTATTCAGATGCTGGGTATTTTACTTGTAGCAAACAGATGCCTGGTTCTCTTGGTCATGAGTTTCAAGATGCCAAGACTTTTGCATCATGGGGTATTGATTATTTGAAGTATGATAACTGTAACAATGATGGATCAAAACCAACTGATAGATACCCTATTATGACTCGGGCTTTAATGATGGCTGGTCGTCCAATCTTCTTCTCACTATGTGAATGGGGAGACTTACACCCAGCTCTATGGGGTGCTAAAGTGGGAAACAGCTGGAGAACTACCAATGACATTAATGATTCATGGGAAAGCATGGTTTCAAGGGCAGATATGAATGAAGTTTATGCAGAGTATGCAAGACCTGGTGGTTGGAATGATCCTGATATGCTTGAGGTGGGAAATGGAGGGATGACAAAAAATGAATATATTGTTCACTTCAGTTTATGGGCCCTTTCCAAGGCTCCTCTTCTTCTTGGCTGTGATGTTAGGAATATGACTAAAGAGACCATGGAGATAGTAGCAAACAAGGAAGTTATTTCAGTTAACCAAGATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATCAAGAGATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATCGTGGCCCTTCGAAAATCTCAATTACAGCCAACTGGGATGACATTGATATTCCACCAAAAAGTGCTGTTGAAGCAAGAGACCTTTGGGAGCTTTTGGAGTCACTGATGTCAATATTTGTTTTTCTTGCTGAGATTTGA 1188 0.4217 MERRVGYEVLVALVTLLVFSFACATASSSGPTKLHHRVEQFRRNLLANGLGRTPPMGWNSWNHFSCQINEKMIRETADALVSTGLSKLGYTYVNIDDCWAELNRDAKGNLVAKNSTFPSGIKALADYVHGKGLKLGIYSDAGYFTCSKQMPGSLGHEFQDAKTFASWGIDYLKYDNCNNDGSKPTDRYPIMTRALMMAGRPIFFSLCEWGDLHPALWGAKVGNSWRTTNDINDSWESMVSRADMNEVYAEYARPGGWNDPDMLEVGNGGMTKNEYIVHFSLWALSKAPLLLGCDVRNMTKETMEIVANKEVISVNQDPLGVQGKKVRMEGDQEIWAGPLSGYRVAVVLLNRGPSKISITANWDDIDIPPKSAVEARDLWELLESLMSIFVFLAEI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01998 395 ProSitePatterns Alpha-galactosidase signature. 89 105 IPR000111 GO:0004553|GO:0005975
Gma18g01998 395 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Gma18g01998 395 Pfam Alpha galactosidase A 53 317 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 PANTHER ALPHA-GALACTOSIDASE 18 380 - -
Gma18g01998 395 Pfam Alpha galactosidase C-terminal beta sandwich domain 329 380 IPR041233 -
Gma18g01998 395 PRINTS Glycosyl hydrolase family 27 signature 125 146 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 PRINTS Glycosyl hydrolase family 27 signature 187 205 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 PRINTS Glycosyl hydrolase family 27 signature 252 271 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 PRINTS Glycosyl hydrolase family 27 signature 48 67 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 PRINTS Glycosyl hydrolase family 27 signature 273 294 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 PRINTS Glycosyl hydrolase family 27 signature 84 99 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 PRINTS Glycosyl hydrolase family 27 signature 160 177 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 SUPERFAMILY (Trans)glycosidases 47 318 IPR017853 -
Gma18g01998 395 CDD GH27 54 317 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 Gene3D - 320 384 IPR013780 -
Gma18g01998 395 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 18 380 IPR002241 GO:0004553|GO:0005975
Gma18g01998 395 SUPERFAMILY Glycosyl hydrolase domain 312 380 - -
Gma18g01998 395 Gene3D Aldolase class I 46 319 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01998 Gma-Chr18 53272926 53276710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01998 1 316 Glycoside Hydrolase AT5G08380 76.176 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01998 K07407 - gmx:100812330 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01998 18 53272926 53276710 Gma09g02497 09 50291258 50294801 GST
Gma18g01998 18 53272926 53276710 Gma03g00022 03 296545 299429 PCT