Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02497 ATGGAGAGAAGGGTTGGCTATGAGGTGCTGGTGGCTTTGGTGACCCTTTTGGTTTTCTCATTGACTTGTGTCACTGCTTCACCATCAGGGCCAACAAAACTTCAAGACCATGTGAAGCAATTCAGGGGGAATCTTCTTGCTAATGGCCTTGGTAGAACTCCTCCAATGGGATGGAACAGTTGGAATCATTTCAGCTGTCAAATTAACGAAAAAATGATCAGAGAAACTGCTGATGCCCTTGTTTCTACTGGTCTTTCCAAGCTTGGATACACCTATGTTAATATAGATGATTGTTGGGCTGAATTAAATCGGGATGCTAAGggtaatctggtagcaaaaaaatcaacatttccttctggaatcaaagctcttgcagattatgttcacagcaagggtcttaagcttggaatttattcagatgctgggtattttacttgtagcaaACAGATGCCTGGTTCTCTTGGTCATGAGTTTCAAGATGCCAAGACTTTTGCATCATGGGGTATTGATTATTTGAAGTATGATAACTGTAACAATGATGGATCGAAACCAACTGATAGATACCCTATTATGACTCGAGCTTTAATGATGGCTGGTCGTCCAATCTTCTTCTCACTATGTGAATGGGGAGACTTGCACCCAGCTTTATGGGGTGCTAAAGTGGGAAATAGCTGGAGAACTACCAATGACATTAATGATTCATGGGAAAGCATGATTTCAAGGGCAGACATGAATGAAGTTTATGCAGAGTATGCAAGACCTGGTGGTTGGAATGATCCTGATATGCTTGAGGTGGGAAATGGAGGGATGACAAAAAATGAATATACTGTTCACTTCAGTTTATGGGCCCTTTCCAAGGCACCTCTTCTTCTTGGCTGTGATGTTAGAAATATAACTAAAGAGACCATGGAGATAGTAGCTAACAAGGAAGTTATTGCAGTTAACCAAGATCCACTTGGTGTACAAGGTAAAAAGGTTAGGATGGAAGGTGATGAAGAGATTTGGGCAGGTCCTCTTTCAGGGTACAGGGTAGCTGTTGTCTTGCTTAATCGTGGCCCTTGGAAAATATCAATTACAGCCAACTGGGATGACATTGGTATTCCACCAAAAAGTGCTGTTGAAGCTAGAGACCTTTGGGAGCACAAGACATTGATGAGACCCTTCGTGGATAAATTGACTGCCACAGTTGATCCACATGGGTGTAAAATGTACGTGCTGAAGCCACTGGCTTGA 1233 0.3852 MERRVGYEVLVALVTLLVFSLTCVTASPSGPTKLQDHVKQFRGNLLANGLGRTPPMGWNSWNHFSCQINEKMIRETADALVSTGLSKLGYTYVNIDDCWAELNRDAKGNLVAKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKQMPGSLGHEFQDAKTFASWGIDYLKYDNCNNDGSKPTDRYPIMTRALMMAGRPIFFSLCEWGDLHPALWGAKVGNSWRTTNDINDSWESMISRADMNEVYAEYARPGGWNDPDMLEVGNGGMTKNEYTVHFSLWALSKAPLLLGCDVRNITKETMEIVANKEVIAVNQDPLGVQGKKVRMEGDEEIWAGPLSGYRVAVVLLNRGPWKISITANWDDIGIPPKSAVEARDLWEHKTLMRPFVDKLTATVDPHGCKMYVLKPLA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02497 410 ProSitePatterns Alpha-galactosidase signature. 89 105 IPR000111 GO:0004553|GO:0005975
Gma09g02497 410 Gene3D - 320 408 IPR013780 -
Gma09g02497 410 PANTHER ALPHA-GALACTOSIDASE 15 410 - -
Gma09g02497 410 SUPERFAMILY Glycosyl hydrolase domain 312 406 - -
Gma09g02497 410 Pfam Alpha galactosidase A 53 317 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 Gene3D Aldolase class I 46 319 IPR013785 -
Gma09g02497 410 Pfam Alpha galactosidase C-terminal beta sandwich domain 330 406 IPR041233 -
Gma09g02497 410 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 15 410 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 SUPERFAMILY (Trans)glycosidases 47 318 IPR017853 -
Gma09g02497 410 CDD GH27 54 317 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 PRINTS Glycosyl hydrolase family 27 signature 48 67 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 PRINTS Glycosyl hydrolase family 27 signature 84 99 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 PRINTS Glycosyl hydrolase family 27 signature 125 146 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 PRINTS Glycosyl hydrolase family 27 signature 160 177 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 PRINTS Glycosyl hydrolase family 27 signature 187 205 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 PRINTS Glycosyl hydrolase family 27 signature 252 271 IPR002241 GO:0004553|GO:0005975
Gma09g02497 410 PRINTS Glycosyl hydrolase family 27 signature 273 294 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02497 Gma-Chr9 50291258 50294801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02497 45 406 Glycoside Hydrolase AT5G08370 67.403 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02497 K07407 - gmx:100804290 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01998 18 53272926 53276710 Gma09g02497 09 50291258 50294801 GST
Gma09g02497 09 50291258 50294801 Gma03g00022 03 296545 299429 PCT