Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01842 ATGGTGCAAAATCCTCCACCCCAAATACGACGTCGTTCAACAACTCCACCGCCCTCACTTTCGCCACCGGCGGCTCTAAACTGCACCACGATTTCATGCCCACGCCGTCCCAGCTCCTCAAGAACCCCCCCGCCGCCTTCGCCATCGTGCCCCGCGACGCCGCCGTCTTCTCCGCCGGAGCCATTGCCGGCGCCGCCGCCAAGACCTTCACCGCGCCGCTCGACCGCATCAAGCTCCTCATGCAGACTCATGGCGTGCGGGTTGGGCAAGAATAGTGCTAAGAAGGCAATAAGTTTCATTCAGGCCATAGCAGTCATAGGGAAAGAAGAAGGTATTCAAGGTTACTGGAAGGGTAACCTCCCTCAGGTGATCCGTGTTGTACCTTACAGTGCTGTCCAGCTTTTTGCTTATGAGATTTATAAGAAAATATTCAGGGGAGAGAATGGCAGGCTATCTGTTGCGGGAAGACTTGCAGCAGGTGCTTTTGCTGGAATGACATCCACTTTTATAACTTACCCATTAGACGTTCTAAGATTGCGATTAGCTGTTGAACCTGGTTATTGGACCATCATGCTAAGGGAGGAAGGATTTGCATTTTTCTACCGTGGCCTTGGGTCTTCTCTAATTGCAATAGCTCCTTATATTGCAGTGAACTTTTGTGTTTTTGACTTATTAAAGAAATCATTGCCTGAGAAATATCAAAAGAGAACTGAAACATCTATACTCACAGCTCGAAGACAGATGCAATTGAAGGGCACACCTTATAAGACAGTATTAGATGCTCTTTCAGGTATTGTGGCACGAGATGGGGTTGCTGGTTTGTATCGGGGATTTGTTCCCAATGCTCTAAAATCCCTGCCTAACAGCAGCATCAAGCTTACCACATATGGCATTGTTAAGCGCCTAATTACTGCTAGCGAGAAAGAATTTCAAACAATTACGGAGGAAAATCGCAACAAACACAAGAACACTAATAATCAATGA 984 0.4756 MVQNPPPQIRRRSTTPPPSLSPPAALNCTTISCPRRPSSSRTPPPPSPSCPATPPSSPPEPLPAPPPRPSPRRSTASSSSCRLMACGLGKNSAKKAISFIQAIAVIGKEEGIQGYWKGNLPQVIRVVPYSAVQLFAYEIYKKIFRGENGRLSVAGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYWTIMLREEGFAFFYRGLGSSLIAIAPYIAVNFCVFDLLKKSLPEKYQKRTETSILTARRQMQLKGTPYKTVLDALSGIVARDGVAGLYRGFVPNALKSLPNSSIKLTTYGIVKRLITASEKEFQTITEENRNKHKNTNNQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01842 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 143 IPR018108 -
Gma18g01842 327 SUPERFAMILY Mitochondrial carrier 92 296 IPR023395 -
Gma18g01842 327 MobiDBLite consensus disorder prediction 1 78 - -
Gma18g01842 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 151 228 IPR018108 -
Gma18g01842 327 PANTHER SOLUTE CARRIER FAMILY 25 86 316 - -
Gma18g01842 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 302 IPR018108 -
Gma18g01842 327 MobiDBLite consensus disorder prediction 38 72 - -
Gma18g01842 327 Pfam Mitochondrial carrier protein 151 231 IPR018108 -
Gma18g01842 327 Pfam Mitochondrial carrier protein 242 304 IPR018108 -
Gma18g01842 327 Pfam Mitochondrial carrier protein 91 146 IPR018108 -
Gma18g01842 327 Gene3D Mitochondrial carrier domain 74 301 IPR023395 -
Gma18g01842 327 PANTHER ADP/ATP CARRIER PROTEIN 86 316 - -
Gma18g01842 327 PRINTS Mitochondrial carrier protein signature 118 138 IPR002067 GO:0055085
Gma18g01842 327 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01842 Gma-Chr18 50985569 50991769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01842 89 320 Organic Solute Cotransporters AT5G01500 71.765 1.87e-128 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01842 K14684 - gmx:100778912 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01842 18 50985569 50991769 Gma18g01842 18 50985569 50991769 ECH
Gma18g01842 18 50985569 50991769 Gma07g01382 07 18288736 18294034 GST
Gma03g00476 03 8663432 8667820 Gma18g01842 18 50985569 50991769 PCT
Gma01g01177 01 41788186 41794091 Gma18g01842 18 50985569 50991769 PCT