Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00476 ATGTCAGAATCAGAGGAGCGAGCCACGCTGACGTGGCGCAAAATCCCCATCCTCCTCAAATCCTCCCCCAACGACGTCGTTCTCGTCCCCCCCACCAGCCCCCGCAAAAACGACGCCGTCACCGGCTTCTTCGCTCCGACCAGTGGCACCCGCTGTAAATTCGCCAGCGTCTCGGTGGCAGAAAGGAAATTCGACAAAGAATTCGCGCCCACGGCGGCACAGCTTCTGCAGCACCCCCTCGCCGTCGTCGCATTGGTTCCCAAAGACGCCGCCCTCTTTCTCGCCGGCGCCCTTGCCGGCGCCGCCGCGAAATCCTTCACTGCCCCCCTCGACCGCATCAAGCTCCTCATGCAGACTCACGGCGTGCGAGTTGGACACGGAAGCGCGAAGAAGGCGATTGGTTTCATTGAGGCCTTAACTGTAATAGGGAAGGAAGAAGGCATCAAAGGTTATTGGAAGGGCAACCTCCCCCAGGTGATTCGGGTTATACCTTACAGTGCTGTCCAGCTTTTTGCTTATGAAATTTACAAGAAAATATTCAAGGGAAAGGATGGTGAGCTCTCTGTTCTGGGAAGACTTGCAGCAGGTGCTTTTGCTGGCATGACATCAACTTTTATAACTTACCCATTAGATGTCCTGAGATTACGATTAGCTGTTGAACCTGGTTATCGAACAATGTCAGAGGTTGCGTTGAGCATGCTAAGAGAGGAAGGATTTGCATCTTTCTACTATGGCCTTGGGCCTTCTCTGATTGGAATAGCTCCATATATTGCAGTGAACTTTTGTGTTTTTGATTTATTAAAGAAGTCATTGCCAGAGAAATATCAAAAGAGAACTGAAACATCTCTAGTCACTGCTGTGGTTTCTGCATCACTTGCCACACTTACATGCTATCCTCTGGATACAGTGCGAAGACAGATGCAATTGAGGGGTACACCTTATAAGACAGTATTAGATGCCATTTCAGGTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGATTTGTGCCCAATGCTTTGAAAAACTTACCAAACAGCAGCATCAGGCTTACTACATATGACATTGTCAAACGCCTAATTGCAGCTAGTGAGAAAGAGTTTCAAACAATTACTGAGGAAAACCGCAACAAACAAAAGAAACCCCAATAG 1155 0.49 MSESEERATLTWRKIPILLKSSPNDVVLVPPTSPRKNDAVTGFFAPTSGTRCKFASVSVAERKFDKEFAPTAAQLLQHPLAVVALVPKDAALFLAGALAGAAAKSFTAPLDRIKLLMQTHGVRVGHGSAKKAIGFIEALTVIGKEEGIKGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFKGKDGELSVLGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLVTAVVSASLATLTCYPLDTVRRQMQLRGTPYKTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFQTITEENRNKQKKPQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00476 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 187 270 IPR018108 -
Gma03g00476 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 277 361 IPR018108 -
Gma03g00476 384 PANTHER ADP/ATP CARRIER PROTEIN 7 374 - -
Gma03g00476 384 PRINTS Mitochondrial carrier protein signature 92 105 IPR002067 GO:0055085
Gma03g00476 384 PRINTS Mitochondrial carrier protein signature 105 119 IPR002067 GO:0055085
Gma03g00476 384 PRINTS Mitochondrial carrier protein signature 154 174 IPR002067 GO:0055085
Gma03g00476 384 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Gma03g00476 384 PRINTS Mitochondrial carrier protein signature 243 261 IPR002067 GO:0055085
Gma03g00476 384 PRINTS Mitochondrial carrier protein signature 286 308 IPR002067 GO:0055085
Gma03g00476 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 87 179 IPR018108 -
Gma03g00476 384 SUPERFAMILY Mitochondrial carrier 90 357 IPR023395 -
Gma03g00476 384 Gene3D Mitochondrial carrier domain 90 362 IPR023395 -
Gma03g00476 384 Coils Coil 362 382 - -
Gma03g00476 384 PANTHER SOLUTE CARRIER FAMILY 25 7 374 - -
Gma03g00476 384 Pfam Mitochondrial carrier protein 281 363 IPR018108 -
Gma03g00476 384 Pfam Mitochondrial carrier protein 186 273 IPR018108 -
Gma03g00476 384 Pfam Mitochondrial carrier protein 92 182 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00476 Gma-Chr3 8663432 8667820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00476 5 381 Organic Solute Cotransporters AT3G51870 69.713 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00476 K14684 - gmx:100796878 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00476 03 8663432 8667820 Gma03g00476 03 8663432 8667820 ECH
Gma03g00476 03 8663432 8667820 Gma01g01177 01 41788186 41794091 GST
Gma03g00476 03 8663432 8667820 Gma18g01842 18 50985569 50991769 PCT
Gma03g00476 03 8663432 8667820 Gma07g01382 07 18288736 18294034 PCT