Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01177 ATGGGGGAGAAGACATCACGAGGGTACACATATGTTGGTTTAAAGTGGGGATGGAAGACTCACGGCGTGCGAGTTGAAGACGAAAGCGCGAAGAAGGCGATTGGTTTCATTGAGGCCATAACTGTAATAGGGAAGGAAGAAGGCATCAAAGGTTATTGGAAGGGCAACCTCCCCCAGTTGATTCGGGTTATACCTTATAGTGTTGTCCAGCTTTTTGCATATGAAATTTACAAGAAAATATTCAAGGGAAAGGATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGTACTTTTGCTGGCATGATATCAACTTTTGTAACTGTTGAACCTGGTTATCGAACAATGTCAGAGGTTGCCTTGAGCATGCTAAGAGAGGAAGGATTTGCATCTTTCTACTATGGCCTTGGGCCTTCTCTGATTGGAATAGCTCCATATATTGCAGTGAACTTTTGTGTTTTTGATTTATTAAAGAAGTCGTTGCCAGAGAAATATCAAAAGAGACCTGAAACATCTCTACTCACTGCTGTGTTTTTTGCATCACTTGCCACACTTACATGCTATCATCTGGATACAGTGCGAAGACAGATGCAATTGAAGGCTGCGCCTTATAAGACAGTCTTAGATGCCATTTCAGGTATTGTGGTAGGGGATGGAATTATTGGCTTGTATCGGGGATTTGTGCCCTACGCTTTGAAAAATTTACCAAACAGCAGTATCATGCTTACTACATATGACATTGTCGAACGTCTAATTGCCGCTAGTGAGAAAGAATTTCAAACAATTACTGAGGAAAACCGCAACAAACAAAAGAAACCCCAATAA 825 0.4194 MGEKTSRGYTYVGLKWGWKTHGVRVEDESAKKAIGFIEAITVIGKEEGIKGYWKGNLPQLIRVIPYSVVQLFAYEIYKKIFKGKDGELSVVGRLAAGTFAGMISTFVTVEPGYRTMSEVALSMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRPETSLLTAVFFASLATLTCYHLDTVRRQMQLKAAPYKTVLDAISGIVVGDGIIGLYRGFVPYALKNLPNSSIMLTTYDIVERLIAASEKEFQTITEENRNKQKKPQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01177 274 Coils Coil 252 272 - -
Gma01g01177 274 Gene3D Mitochondrial carrier domain 14 251 IPR023395 -
Gma01g01177 274 Pfam Mitochondrial carrier protein 30 83 IPR018108 -
Gma01g01177 274 Pfam Mitochondrial carrier protein 115 163 IPR018108 -
Gma01g01177 274 Pfam Mitochondrial carrier protein 171 253 IPR018108 -
Gma01g01177 274 PANTHER ADP/ATP CARRIER PROTEIN 22 264 - -
Gma01g01177 274 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 80 IPR018108 -
Gma01g01177 274 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 160 IPR018108 -
Gma01g01177 274 PANTHER SOLUTE CARRIER FAMILY 25 22 264 - -
Gma01g01177 274 SUPERFAMILY Mitochondrial carrier 30 247 IPR023395 -
Gma01g01177 274 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 251 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01177 Gma-Chr1 41788186 41794091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01177 14 271 Organic Solute Cotransporters AT3G51870 67.658 7.78e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01177 K14684 - gmx:100796878 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00476 03 8663432 8667820 Gma01g01177 01 41788186 41794091 GST
Gma01g01177 01 41788186 41794091 Gma18g01842 18 50985569 50991769 PCT
Gma01g01177 01 41788186 41794091 Gma07g01382 07 18288736 18294034 PCT