Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01242 ATGCACAACATGAGCACTCTCGTTTTCTTTATCCTTCTTTCAACGCTACTAAGTGTTTGTTACGGTGGTCGCGACTTAGTAGATAAAAACCCGTTCACCGAGCAGGCTTACGTGGCACGCTACTGGGACAAACATGTTGGCAACAACTTGCCAAAGCCATCGTTTCTTCTCTCCAAAGCCTCTCCAATGAGCGCTTCCGACACGGCGTCGTTCGCGAACCTCGCCGCCACCAACTCCCTCTCCACGCGGCTGCCGGAGTTCTGCTCCGCGGCGCACCTCCTCTGCTTCCCGGAGGTCCGGCCCAGCCTCGAGAAACACACCGGAGACTCCGATTTCCAGACCTACAACGACGGCCAGAACTTCACCAACTACGGCACCGACTTCGCCGGCGGCCTCGACACCTTCAAGAACTACTCCAACGACCTCTTCAGCACTCCGGTGAACGACTTCCGCCGCTACAGCCGCGGCGCCGCCGGCCACGAGGAAAGATTTTCCGCCTACGCCGGCGACACCAACGTCGCCGACCAGAGCTTCAGCACCTACGGCACCAACGCCGCCGGCGGCTCCGGCGAGTTCAAAAACTACTCCCGCAACTCCAACGTCCCCGACCTACGCTTCACCACCTACTCCGACAGCACCGGCGGGAGAACGCAATCGTTCTCCAGCTACAGCGAAGACGGCAACGCCGGCGGCCAGACCTTCCAATCCTACGGAAAGAACTCCGCCGGCGCGGCGAACGACTTCGCCGCCTACGGCACAGACTCCAACGTCGCCTCTTCAGATTTCACGAACTACGGAAAGGGAGGTGCGGGCCCCAACGACACGTTCACGAATTACGGCGTTAACATGAACAACCCTACGGAGACGTTTCAGAGCTACGCAGACGGAACCGTTGGTGGAACGCAGAGTTTTTCCAACTACAGAGACCAAGCTAACGTAGGTGCTGACTCGTTCCAATCCTACGCTAAGAACACGTTAGGGTCCGAAGCGGATTTTAAAAACTACGGGAATTCGTTCAACCCTGGTTCGGACACTTTCAAAGGCTACGCTAAAGGCGCAGAAGATAACAAGGTTGGCTTCACAACCTACAGCGCTAACACAAACGCTACCTTTAAAGATTACGCCAAACACGGCGTTTCCTTTGCTAGTTACAACGTCTCTTCGGAATCTAAAACAGTCAGTAGCAGTGTGGTAAAAAGGTGGGTTGAACCGGGTAAGTTTTTTCGCGAGACCATGCTTAAGGAAGGCACTGTTATGCCCATGCCCGATATAAGGGATAAGATGCCGAAAAGGTCGTTTTTGCCCCGCGCTATTTTAACCAAATTGCCCTTCTCGTCTGCGAAGGTTGACGAGTTGAAGCGTGTGTTTAAGGTGTCTGAGAACTCATCAATGGACAAAATGATCATGGACTCGTTGGGAGAGTGCGAGAGGGCACCCAGCGTGGGTGAGACCAAACGCTGTGTGGCTTCCGTGGAGGACATGATTGACTTTTCAACCTCCGTTTTGGGCCGGAATGTGGCAGTTTGGACCACAGAGAATGTAAAAGGGTCCAATAAGAATGTGATGGTGGGTCGGGTTAAAGGGATGAATGGTGGGAAGGTGACAAAATCGGTGTCGTGCCACCAGAGCTTGTTCCCTTATTTGCTTTACTACTGCCACTCCGTTCCTAAGGTTCGGGTCTACGAAGCGGATCTTTTGGACCCCGAATCTAAGGCCAAGATTAACCACGGTGTTGCTATCTGCCACTTGGACACAACTGCGTGGAGCCCCACCCACGGTGCATTCTTGGCACTCGGGTCGGGTCCGGGTAGGATTGAAGTGTGTCACTGGATCTTCGAGAATGACTTGACATGGACTATTGCTGACTGA 1869 0.5409 MHNMSTLVFFILLSTLLSVCYGGRDLVDKNPFTEQAYVARYWDKHVGNNLPKPSFLLSKASPMSASDTASFANLAATNSLSTRLPEFCSAAHLLCFPEVRPSLEKHTGDSDFQTYNDGQNFTNYGTDFAGGLDTFKNYSNDLFSTPVNDFRRYSRGAAGHEERFSAYAGDTNVADQSFSTYGTNAAGGSGEFKNYSRNSNVPDLRFTTYSDSTGGRTQSFSSYSEDGNAGGQTFQSYGKNSAGAANDFAAYGTDSNVASSDFTNYGKGGAGPNDTFTNYGVNMNNPTETFQSYADGTVGGTQSFSNYRDQANVGADSFQSYAKNTLGSEADFKNYGNSFNPGSDTFKGYAKGAEDNKVGFTTYSANTNATFKDYAKHGVSFASYNVSSESKTVSSSVVKRWVEPGKFFRETMLKEGTVMPMPDIRDKMPKRSFLPRAILTKLPFSSAKVDELKRVFKVSENSSMDKMIMDSLGECERAPSVGETKRCVASVEDMIDFSTSVLGRNVAVWTTENVKGSNKNVMVGRVKGMNGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKAKINHGVAICHLDTTAWSPTHGAFLALGSGPGRIEVCHWIFENDLTWTIAD 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01242 622 SMART BURP_2 405 621 IPR004873 -
Gma18g01242 622 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 6 622 - -
Gma18g01242 622 Pfam BURP domain 407 619 IPR004873 -
Gma18g01242 622 ProSiteProfiles BURP domain profile. 407 621 IPR004873 -
Gma18g01242 622 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 6 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01242 Gma-Chr18 20226731 20228955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01242 - - gmx:100779518 1256.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01242 18 20226731 20228955 Gma18g01242 18 20226731 20228955 ECH
Gma01g00290 01 3282407 3284403 Gma18g01242 18 20226731 20228955 PCT
Gma02g00309 02 3231211 3233821 Gma18g01242 18 20226731 20228955 PCT
Gma18g01242 18 20226731 20228955 Gma01g00290 01 3282407 3284403 PCT
Gma18g01242 18 20226731 20228955 Gma02g00309 02 3231211 3233821 PCT