Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00290 ATGAACAAACAACTCACGCTGCTCTGTCTCTTTATCCTCTTCTCATTTCTCAGTGTGGGTTTCGCCGGCGCCGGAGACGCGGCGGAGAAAAACCCTTTCACCCCAAAAGCCTTCGCCATTCGTTATTGGGACAAAGAGATCCGCAGCGGGTTGGCGAAGCCACAGTTTCTTCTGTCTAAGGCGTCGCCGCTAAACGCGGCGGAGGCGGCGGCGTTTGTGAAGCTTGCCTCCGGCAACGCGCTCTCCACGCGGCTGCCGGAATTCTGCGCCGCCGCGAAGCTCCTCTGCTTCCCGGAGGTGGGGTCCAGCCTCGAGAAGCACGACAAAGACGCAAACTTTGCAGTGTACAGAGACAAGAACTTCACCAACTATGGAACGGGTCGACCCGGTGGGCTCGACTCGTTCAAAAACTACTCCGAGGGAGAGAATATTCCAGTGAACGATTTCCGGCGATACAGCCGTGACTCCGCCGGCCACAAGGACGGGTTTTTAAGCTACGGCACGAGCGGCAACGTCGTGCAGCAGAGCTTCCACACCTACGCCGCCGGAGCCACCGGCGGTGCCGGCGAGTTCAAGCGCTACGCCGACGAAACCAACGTTCCCAACCTTGGTTTCACCTCCTACTCCGACAACGCCAACGGCAGAACCCAATCCTTCACTTCCTACTCCGAAAACGGCAATGCCGGCGAGCAGACATTCACCTCGTACGGCAAAAACGGCAACGGCCCGACCAACGTGTTCACCTCGTATGGAACAGAGTCCAACGTTGTCGGGTCAGGGTTCTCCAACTACGTCGAGACCGCCAACGCCGCCAACGACACCTTCAAGGGATACGGCGTCGACATGAACAACCCCACCAACACGTTCTCCAACTACGCCGGCGGCGGCAACGGCGCCGTCGAGAGATTCTCCAGCTACCGCGATAAGGCCAACGTCGGAGCCGACTCCTTCACCTCGTACGCCAAGTCCGCCAACGCCGCCGACATCGGATTCTCCAACTACGGCAAGTCCTTCAACGAGGGAACCGACACGTTCACCTCGTACGCCAAATCCTCGGACGGCGAAACAAAAGTAGGTTTCACTTCCTACGGCGTAAACAACACCTTCAAGGATTACGAGAAAAAGGGTACCACTGTTTCCTTCGCCAGATACACCAACATTAGCACAACTCTCTCAGCTTCAGCTTCAGCTTCATCACTCAGTGGCAGCTTCGTAAATAAATGGGTGGAGCCGGGTAAATTTTTTCGTGAAAAGATGTTGAAGGAAGGGACGGTGATGCCGATGCCTGACATAAAAGATAAATTGCCAGAAAGGTCGTTTTTGCCCCGGAGTATTCTATCGAAATTACCGTTTTCGGTTTCGAAAATTGATGAGTTGAAGCAAGTTTTCAAGGCTTCGGATAACGGTTCCATGGAGAAGATGATGCGTGATTCCTTGGCGGAGTGCGAGCGTGCACCGAGCCGCGGCGAGACAAAACGCTGCGTTGGGTCGCTCGAGGACATGATCGACTTTGCCACCTCTGTTTTGGGCCGAAACGTCGCCGTTCGGACTACCCAGAACGTGAACGGGTCCAAGAAGAGTGTGGTGGTGGGGCCCGTTAGGGGAATCAACGGTGGTAAAGTCACCCAATCCGTGTCGTGCCACCAGAGCCTGTTCCCTTATCTGCTTTACTACTGCCACGCGGTTCCTAAGGTTCGGGTCTACGAAGCGGATCTTCTCGACCCGAAAACAAAGGTCAAGATTAACCGTGGTGTTGCCATCTGTCACTTGGACACCTCCGATTGGAGCCCGACCCATGGAGCATTCATCTCGTTAGGGTCGGGTCCAGGTCGGATTGAGGTGTGCCACTGGATCTTCGAGAATGACGTGGCGTGGACCATTGTGAAGTGA 1890 0.555 MNKQLTLLCLFILFSFLSVGFAGAGDAAEKNPFTPKAFAIRYWDKEIRSGLAKPQFLLSKASPLNAAEAAAFVKLASGNALSTRLPEFCAAAKLLCFPEVGSSLEKHDKDANFAVYRDKNFTNYGTGRPGGLDSFKNYSEGENIPVNDFRRYSRDSAGHKDGFLSYGTSGNVVQQSFHTYAAGATGGAGEFKRYADETNVPNLGFTSYSDNANGRTQSFTSYSENGNAGEQTFTSYGKNGNGPTNVFTSYGTESNVVGSGFSNYVETANAANDTFKGYGVDMNNPTNTFSNYAGGGNGAVERFSSYRDKANVGADSFTSYAKSANAADIGFSNYGKSFNEGTDTFTSYAKSSDGETKVGFTSYGVNNTFKDYEKKGTTVSFARYTNISTTLSASASASSLSGSFVNKWVEPGKFFREKMLKEGTVMPMPDIKDKLPERSFLPRSILSKLPFSVSKIDELKQVFKASDNGSMEKMMRDSLAECERAPSRGETKRCVGSLEDMIDFATSVLGRNVAVRTTQNVNGSKKSVVVGPVRGINGGKVTQSVSCHQSLFPYLLYYCHAVPKVRVYEADLLDPKTKVKINRGVAICHLDTSDWSPTHGAFISLGSGPGRIEVCHWIFENDVAWTIVK 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00290 629 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 628 - -
Gma01g00290 629 SMART BURP_2 412 628 IPR004873 -
Gma01g00290 629 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 628 - -
Gma01g00290 629 ProSiteProfiles BURP domain profile. 414 628 IPR004873 -
Gma01g00290 629 Pfam BURP domain 414 626 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00290 Gma-Chr1 3282407 3284403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00290 - - gmx:100776642 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00290 01 3282407 3284403 Gma01g00290 01 3282407 3284403 ECH
Gma01g00290 01 3282407 3284403 Gma02g00309 02 3231211 3233821 GST
Gma01g00290 01 3282407 3284403 Gma18g01242 18 20226731 20228955 PCT
Gma18g01242 18 20226731 20228955 Gma01g00290 01 3282407 3284403 PCT