Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00309 atgaacaaacaactcaggctgctctgtctctttatcctcttctccttatttctctGTGTGGGTTTCGCCGGCGCCGGAGACGCGGCGGAGAAAAACCCGTTCACCCCAAAAGCCTTCGCGATTCGGTATTGGGACAAAGAGATCCGCAGCGGGTTACCGAAGCCACCGTTTCTTGTATCAAAGGCGTCGCCGCTGAGCGCGGCGGAGGCGGCGGCGTTCTTAAAGCTCGTCTCCGGGAACTCGCTCTCCACGCGGCTGCCGGAATTCTGCGCCGCCGCGAAGCTCCTCTGCTTCCCGGAGGTGGGGCCCCGCCTCGAGAAACACGACAAAGACGCGAACTTTGCTGTTTACAGAGACAATAACTTCACCAACTACGGAACGGGTCGACCTGGTGGACTCGACTCGTTTAAAAACTACTCCGAGGGAGAGAATATTCCGGTGAACGATTTCCGGCGATATAGCCGCGACTCCGCCGGGCATAAAGATGGTTTTCTGAGCTACGGCACGAACGGCAACGTGGTGCAGCAGAGCTTCCATACCTACGCCGCCGGAGCCACCGGCGGCACCGGCGAGTTCAAGCACTACGCCGACGAAACCAACGTCCCGAACCTCGGCTTCACCTCCTATTCCGACAACGCCAACGGCAGAACCCAATCTTTCTCTTCCTACTCCGAAAACGGCAATGCCGGCGAGCAGACATTCACCTCGTACGGCAAAAATGGCAACGGCCCGACCAACGTGTTCGCCTCGTACGGAACAGAGTCCAACGTTGTCGGGTCCGGGTTCTCCAACTACGCTGAGACCGCCAACGCCGCCAACGACACCTTCAAAGGCTACGGCATAGACATGAACAACCCCACCAACACGTTCTCCAACTACGCTGCCGGCGGCAACGGCGCCGTCGAGAGATTCTCCAGCTACCGCGACAAGGCCAACGTCGGCGCCGACTCCTTCACCTCGTACGCCAAAGCCGCCAACGCCGCAGACATCGGATTCTCGAACTACGGCAAGTCCTTCAACGAGGGAACCGACACGTTCACCACGTACGCTAAATCCTCGGATGGCGAAACAAAAGTAGGGTTCACTTCCTACGGCGTAAACAACACTTTCAAGGATTACGAGAAAAAGGGTACCACTGTCTCATTCGCCAGGTACACCAACATTAGCACGACCCTCTCAGTTTCAGCTTCATCAGTCAGTGGCAGTTTGGTAAATAAGTGGGTGGAGCCGGGTAAGTTTTTTCGTGAGAAGATGATGAAGGAAGGAACCGTGATGCCGATGCCTGACATAAAAGATAAAATGCCGGAAAGGTCGTTTTTGCCCCGGAGCATTTTATCGAAATTACCGTTTTCGGTTTCGAAGATTGATGAGTTGAAGCAAGTCTTCAAGGCTTCTGATAACGGCTCCATGGAGAAGATGATGAAGGACTCGTTGGAGGAGTGCGAGCGTGCACCGAGTAGCGGCGAGACAAAACGCTGCGTTGGGTCGCTCGAGGACATGATCGACTTTGCAACCTCTGTTTTGGGCCGAAACGTCGCCGTTCGGACTACCCAGAACGTGAACGGGTCCAAGAAGAGTGTGGTGGTGGGGCCCGTCAGGGGAATCAACGGTGGTAAAGTCACCCAATCAGTGTCGTGCCACCAGAGCCTGTTCCCTTACCTGCTCTACTACTGCCACGCGGTTCCTAAGGTTCGGGTCTACGAAGCGGATCTTCTCGACCCGAAAACAAAAGCTAAGATTAACCGCGGAGTTGCCATCTGCCACTTGGATACATCGGATTGGAGCCCCACACACGGAGCGTTTCTCTCGCTCGGGTCGGTCCCGGGTCGGATCGAGGTGTGCCACTGGATCTTTGAGAACGACATGGCGTGGACCATTGCGGATTGA 1887 0.5443 MNKQLRLLCLFILFSLFLCVGFAGAGDAAEKNPFTPKAFAIRYWDKEIRSGLPKPPFLVSKASPLSAAEAAAFLKLVSGNSLSTRLPEFCAAAKLLCFPEVGPRLEKHDKDANFAVYRDNNFTNYGTGRPGGLDSFKNYSEGENIPVNDFRRYSRDSAGHKDGFLSYGTNGNVVQQSFHTYAAGATGGTGEFKHYADETNVPNLGFTSYSDNANGRTQSFSSYSENGNAGEQTFTSYGKNGNGPTNVFASYGTESNVVGSGFSNYAETANAANDTFKGYGIDMNNPTNTFSNYAAGGNGAVERFSSYRDKANVGADSFTSYAKAANAADIGFSNYGKSFNEGTDTFTTYAKSSDGETKVGFTSYGVNNTFKDYEKKGTTVSFARYTNISTTLSVSASSVSGSLVNKWVEPGKFFREKMMKEGTVMPMPDIKDKMPERSFLPRSILSKLPFSVSKIDELKQVFKASDNGSMEKMMKDSLEECERAPSSGETKRCVGSLEDMIDFATSVLGRNVAVRTTQNVNGSKKSVVVGPVRGINGGKVTQSVSCHQSLFPYLLYYCHAVPKVRVYEADLLDPKTKAKINRGVAICHLDTSDWSPTHGAFLSLGSVPGRIEVCHWIFENDMAWTIAD 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00309 628 Pfam BURP domain 413 625 IPR004873 -
Gma02g00309 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 9 628 - -
Gma02g00309 628 SMART BURP_2 411 627 IPR004873 -
Gma02g00309 628 ProSiteProfiles BURP domain profile. 413 627 IPR004873 -
Gma02g00309 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 9 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00309 Gma-Chr2 3231211 3233821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00309 - - gmx:100797939 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00309 02 3231211 3233821 Gma02g00309 02 3231211 3233821 ECH
Gma01g00290 01 3282407 3284403 Gma02g00309 02 3231211 3233821 GST
Gma02g00309 02 3231211 3233821 Gma18g01242 18 20226731 20228955 PCT
Gma18g01242 18 20226731 20228955 Gma02g00309 02 3231211 3233821 PCT