Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01161 ATGAAGAGGGTGAAGAAGCTATACCCATTTTTGGTCCTACCCAACAGGCCTAAACCTCTTCAAATTTTCATGGCTGTGATGTTCCTCTACTTGCTCTTCACCACCTTCGAAATCGAAACCTCTCTTGGTTTCAGAACGAGGTTTGTGTCAGTGTCCTCATTGTTGGGGAATGAAGATCAACACCAACGTACCCATTCCAGCAAAGCCTCAAACTTTCCCTCACAAGGGGTGTTCCAAGGCTCACTGCATCGAAAAGCCTTGCAGGGTTTGCAGAAAGTTTCCACCTTGAGTTTCATCGAGGCTTTGAATGACACCACTGTGGAAGAAAACATGTTTTCTGAACTCCACAAGGCTGCTAGGCATGCTTGGGTTGAAGGGAAGAGGCTCTGGGAACAAGTTGAGAGTGTGAAAGAAACCATGAATGTGGCAAGGTTCAAGGCTGAGAACCTTTCTGATTCGTGTCAGCATTCAATTTCATTATCTGGGTCTGAATTGAGGAAGCAGAATAAAGGGGTCATGGTGATGGTGCTTCCTTGTGGTTTGACATTGGGGTCTCACGTGACTGTTGTGGGGACCCCACGTTGGGCTCACTGGGAGGACGATCCTAAGATATCTGTGGTGAAGGAAGAGGAGGGAAAGGTAATGGTGTCGCAGTTCATGATGGAGCTTCAGGGTTTGAAGAGTGTGGACAAGGAAGAGCCTCCTAGGATACTGCATTTCAATCCCAGGTTGAAGGGGGATTATAGTGGGAGGCCTGTGATTGAGCAGAACACTTGTTACAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGATGGAAGTCCCGAGCTGACGAGGATACAGTTGATGGACAGGTGAAATGTGAAAAGTGGATTCGTGATGATGATAGCCATGCAGAAGAGGCAAAGGCAACATGGTGGTTAACCAGACTGATTGGGCGAACTAAGAAGGTTACTATAGATTGGCCATACCCTTTTGTAGAGGCTAGATTGTTTGTTCTCACCGTGAGTGCTGGCATGGAAGGCTACCATGTTAGTGTGGATGGAAGGCATGTGACATCTTTTCCCTATCGCACGGGATTTTCTCTTGAGGATTCAACTGGTCTATCCATAAAAGGGGATGTTGATGTGCACTCTATATATGCAGCTTCCTTACCCACATCACATCCAAGTTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCAATGGAAAGCTCCACCTCTTGTACACGTGAATGTGGAGCTTTTCATTGGAATACTTTCTGCTGGCAACCATTTTGCTGAGCGGATGGCAGTAAGGAAATCATGGATGCAACATAAACTAATCAAATCTTCAAATGTCGTATCTCGGTTCTTTGTTGCCTTGCATGGAAGGAAAGATTTAAATATGGAGATAAAGAAAGAAGCAGATTATTTTGGCGATATTATTATAGTCCCCTACATGGATCATTATGACCTTGTTGTGTTGAAGACGATAGCTATCACTGAATATGGGATTCGCTCAGTGGCTGCCAAGTATATCATGAAGTGTGATGATGACACGTTTGTCAGAATAGAGTCTATCATCAGCGAAGCAAGAAAAGTAGGAAGTGGTAGAAGTCTCTATATAGGAAATATGAATTACCACCATAGGCCCCTACGTTCTGGCAAATGGGCAGTAACATATGAGGAATGGTCAGAGGAAGAGTATCCTACCTATGCTAATGGTCCAGGCTATACAATCTCTGCAGACATTGCCCAGTTCATTGTATCCAACTTCGAGGAGCACAGATTAAAATTATTTAAAATGGAGGATGTTAGCATGGGAATGTGGGTAGAGCAATTCAACAGTTCAAGGCCAGTTGAGTATGTGCACAGCTTCAAGTTCTGCCAATTTGGGTGCATTGAAGATTACTACACTGCACATTACCAATCTCCAAGACAAATGACCTTACTGAGTATAGATGTGGTAGACGGGAACTCATTTAATTGGGAGGGGAAAAGGCATTACTACCTTCAATCTTTAATTGGGTGTATTGCACCGGATTTGAACAACATGTCATTGATGAAGAAACCAAAGATGTTAGTAGGGCTGGGAGAAGAACGCGTTGACAAGGCTGAGGTAGAGTTGGCCATGCATGTTGTTTCCGAAGGCAACAAGGTCGTCACCAAATTCATGTACATCACACCACCGTTTGTGGAGGAGCTCATGGAGGACCACCACCGTGAGAAAGTTCTGCCAAATCCGATAAGAACATTTGGCGCCTATCGTGGGGCAAGTGAAAACTTCTCCTTCGACCCTTACAGCCAACCAAGAAAGACCACCATGGGGGTAGGCATCCACCATACTTGGAATGCCTACCATAGGGACCCTCGAAAATGGGAGTCTGGCAACCGTGGTGGACCTCCCGCGTCAGGTGCTCGACGATCATGA 2415 0.4555 MKRVKKLYPFLVLPNRPKPLQIFMAVMFLYLLFTTFEIETSLGFRTRFVSVSSLLGNEDQHQRTHSSKASNFPSQGVFQGSLHRKALQGLQKVSTLSFIEALNDTTVEENMFSELHKAARHAWVEGKRLWEQVESVKETMNVARFKAENLSDSCQHSISLSGSELRKQNKGVMVMVLPCGLTLGSHVTVVGTPRWAHWEDDPKISVVKEEEGKVMVSQFMMELQGLKSVDKEEPPRILHFNPRLKGDYSGRPVIEQNTCYRMQWGSALRCEGWKSRADEDTVDGQVKCEKWIRDDDSHAEEAKATWWLTRLIGRTKKVTIDWPYPFVEARLFVLTVSAGMEGYHVSVDGRHVTSFPYRTGFSLEDSTGLSIKGDVDVHSIYAASLPTSHPSFAPQMHLELLPQWKAPPLVHVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSNVVSRFFVALHGRKDLNMEIKKEADYFGDIIIVPYMDHYDLVVLKTIAITEYGIRSVAAKYIMKCDDDTFVRIESIISEARKVGSGRSLYIGNMNYHHRPLRSGKWAVTYEEWSEEEYPTYANGPGYTISADIAQFIVSNFEEHRLKLFKMEDVSMGMWVEQFNSSRPVEYVHSFKFCQFGCIEDYYTAHYQSPRQMTLLSIDVVDGNSFNWEGKRHYYLQSLIGCIAPDLNNMSLMKKPKMLVGLGEERVDKAEVELAMHVVSEGNKVVTKFMYITPPFVEELMEDHHREKVLPNPIRTFGAYRGASENFSFDPYSQPRKTTMGVGIHHTWNAYHRDPRKWESGNRGGPPASGARRS 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01161 804 Pfam Galactosyltransferase 429 609 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma18g01161 804 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 7 650 - -
Gma18g01161 804 SUPERFAMILY Concanavalin A-like lectins/glucanases 175 381 IPR013320 -
Gma18g01161 804 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 173 383 IPR001079 GO:0030246
Gma18g01161 804 Gene3D - 168 381 - -
Gma18g01161 804 Gene3D - 408 664 - -
Gma18g01161 804 SMART Gal_bind_lectin_2 177 382 IPR001079 GO:0030246
Gma18g01161 804 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 650 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma18g01161 804 CDD GLECT 177 380 IPR001079 GO:0030246
Gma18g01161 804 Pfam Galactoside-binding lectin 174 381 IPR001079 GO:0030246
Gma18g01161 804 MobiDBLite consensus disorder prediction 784 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01161 Gma-Chr18 17308013 17317171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01161 18 646 Glycosyltransferase AT1G74800 58.896 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01161 K20843 - gmx:100814480 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01161 18 17308013 17317171 Gma18g01161 18 17308013 17317171 ECH
Gma17g00141 17 1197079 1197753 Gma18g01161 18 17308013 17317171 GST
Gma01g00363 01 4385757 4390660 Gma18g01161 18 17308013 17317171 PCT
Gma02g00228 02 2241583 2246509 Gma18g01161 18 17308013 17317171 PCT
Gma18g01161 18 17308013 17317171 Gma01g00363 01 4385757 4390660 PCT
Gma18g01161 18 17308013 17317171 Gma02g00228 02 2241583 2246509 PCT