Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00228 ATGAAGAGGGGTAGTAGTACTAGTAGTAAAGTAGAGCCATTTGTGCTACCCAACAGGCTCACACTGCTTCAGATTTTCATGGTGGTGATGCTCCTTTACCTTCTCTTCATGAGCTTCGAAATCCCTCTAGCTTTCAGAGCCGAAAACGGGGTCGTTTTCCTCACCGACGCATTGCCCATGCCCATGCCACTCATGCTCGAAGAATCACGCAACAGTGTCAAAATCAGAGCACCGACAGGGTTAAAGTTGGAGAAAGTTTCCACCTTGAGGTTCAACGAGAGCTTCACGGAGGGTTCGGAGCTGCACAAGGTGGCGCGGCACGCGTGGGTTGCCGGGGAGAAGCTCTGGGGGGAAGTGGAGAGCGGCAAAGTGAAGAGCTTTGCGAAAATTAAGGTAAAAAACGGGTCGGATTCGTGTCCGAATTCGGTGTCGGTCGCCGGGACGGAGTTCCGGGACAAAGGGGTGTTGGTGCTGCCGTGTGGGCTGACGCTCTGGTCGCACGTGACGGTGGTGGGGACGCCGCGGTGGGCCCACGCCGAGAGTGACCCGAAGATAGCGGTGGTGAGGGACGGGGGAGAGGCGGTGATGGTGTCGCAGTTCATGATGGAGTTGCAAGGGTTGAAGGCAGTGGACAAGGAGGAGCCGCCGAGGATTCTGCATTTCAATCCGAGGCTGAGAGGGGATTGGAGTGGGAAGCCAGTGATTGAGCAGAACACTTGCTATAGGATGCAATGGGGTTCTGCTATCAGGTGTGATGGGTGGAAATCTCGTGCGGATGAAGAAACTGTTGATGGACATGTGAAATGTGAAAAGTGGATTCGTGATGACAATAATCATTCTGAAGAGTGGAAGGCGACATGGTGGTTAAACAGATTGATAGGGCGAAAAAAGAAGATGATGGTAGACTGGCCATATCCTTTTGCGGAGGGCAAGTTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATGTTAGTGTGGACGGGAGGCATGTGACATCCTTTCCCTATCGCACGGGGTTTGCCCTTGAGGATGCTACTGGACTATCTATAAATGGGGATGTTGATGTACACTCTATATTTGCTGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCAGTGGAAAGCTCCTCCTCTTCAGAATGTGAATGTGGAGCTTTTCATTGGTATCCTTTCTGCTGGAAACCATTTTGCTGAACGGATGGCAGTGAGGAAGTCCTGGATGCAGCATAAGCTAATCCAATCTTCACGTGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATAAATGTGGACATAAAGAAAGAAGCAGAGTATTTTGGTGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCGGACCATGACTTCTAAGTATATAATGAAATGTGATGATGACACGTTTGTCAGAGTGGATTCTATCCTAAACGAAGCAAGACAAGTTCGAAGTAGAAGTCTGTACATGGGAAATATGAATTATCACCATAGGCCTCTTCGCCATGGGAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAATATCCCATCTATGCTAACGGTCCAGGTTACATAGTCTCAGCTGACATTGCTCAGTTCATTGTATCTGAATTTGAGAAGCGCAAATTAAAATTATTCAAAATGGAGGACGTGAGCATGGGAATGTGGGTGGAGCACTTCAACAGCACAAGACCGGTAGAGTACATGCACAACTTGAAGTTCTGCCAATTTGGGTGCATTGAAGAGTACTACACTGCACACTACCAATCACCAAGGCAAATGACATGCATGTGGGAAAAATTGCAACATCAAGGAAAATCACTCTGTTGCAACATGAGATGA 1929 0.4764 MKRGSSTSSKVEPFVLPNRLTLLQIFMVVMLLYLLFMSFEIPLAFRAENGVVFLTDALPMPMPLMLEESRNSVKIRAPTGLKLEKVSTLRFNESFTEGSELHKVARHAWVAGEKLWGEVESGKVKSFAKIKVKNGSDSCPNSVSVAGTEFRDKGVLVLPCGLTLWSHVTVVGTPRWAHAESDPKIAVVRDGGEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGSAIRCDGWKSRADEETVDGHVKCEKWIRDDNNHSEEWKATWWLNRLIGRKKKMMVDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKAPPLQNVNVELFIGILSAGNHFAERMAVRKSWMQHKLIQSSRVVARFFVALHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTMTSKYIMKCDDDTFVRVDSILNEARQVRSRSLYMGNMNYHHRPLRHGKWAVTYEEWVEEEYPIYANGPGYIVSADIAQFIVSEFEKRKLKLFKMEDVSMGMWVEHFNSTRPVEYMHNLKFCQFGCIEEYYTAHYQSPRQMTCMWEKLQHQGKSLCCNMR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00228 642 Pfam Galactosyltransferase 410 588 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma02g00228 642 Gene3D - 154 362 - -
Gma02g00228 642 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 154 364 IPR001079 GO:0030246
Gma02g00228 642 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 14 642 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma02g00228 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 156 362 IPR013320 -
Gma02g00228 642 Pfam Galactoside-binding lectin 156 362 IPR001079 GO:0030246
Gma02g00228 642 SMART Gal_bind_lectin_2 158 363 IPR001079 GO:0030246
Gma02g00228 642 Gene3D - 387 641 - -
Gma02g00228 642 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 14 642 - -
Gma02g00228 642 CDD GLECT 158 362 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00228 Gma-Chr2 2241583 2246509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00228 23 642 Glycosyltransferase AT1G74800 61.679 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00228 K20843 - gmx:100818349 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00228 02 2241583 2246509 Gma02g00228 02 2241583 2246509 ECH
Gma01g00363 01 4385757 4390660 Gma02g00228 02 2241583 2246509 GST
Gma02g00228 02 2241583 2246509 Gma17g00141 17 1197079 1197753 PCT
Gma02g00228 02 2241583 2246509 Gma18g01161 18 17308013 17317171 PCT
Gma17g00141 17 1197079 1197753 Gma02g00228 02 2241583 2246509 PCT
Gma18g01161 18 17308013 17317171 Gma02g00228 02 2241583 2246509 PCT