Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00363 ATGAAGAGGGGTAGTAGTAAAGTAGACCCCTTTGTGCTACCCAACAGGCTGACACTGCTTCAGATTTTCATGGTGGTGATGCTCCTTTACCTTCTCTTCATAAGCTTCGAAATCCCTCTCGCTTTCAGAGCCGGGCTAGGTACCGAAAACGGCGCCGTTTTCCTCACCGACGCATTGCCCATGCCCATGCCGCTCTTGCTCGAAGAATCACACAACAGGGTCGAAATTAGAGCACCCAGAGGGCTGAAGTTGGAGAAAGTTTCCACCTTGAGGTTCAACGAGAGCTTCTCGGAGGGTTCGGAGCTGCACAAGGTGGCGCGGCACGCGTGGGTCGCGGGGGAGAAGCTCTGGGGGGAAGTGGAGAGCTTCGTGAAAATTAAGGTCGAAAACGGGTCGGACTCGTGCCCGAATTCGGTGTCGGTGTCCGGGGCGGGGTTCCGCGACAAGGGGGTGATGGTGCTGCCGTGCGGGCTGACGCTCTGGTCGCACGTGACGGTGGTGGGGACGCCACGGTGGGCGCACGCCGAGAGGGACCCGAAGATTGCGGTGGTGAGGGACGGGGGCGAGGCGGTGATGGTGTCGCAGTTCATGATGGAGTTGCAAGGCTTGAAGGCCGTGGACAAGGAGGAGCCGCCGAGGATTCTGCATTTCAATCCGAGGCTGAGAGGTGATTGGAGTGGGAAGCCAGTGATTGAGCAGAACACTTGTTATAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGGTGGAAGTCTCGTGCGGATGAAGAAACTGTTGATGGACATGTGAAATGTGAAAAGTGGATTCGTGATGACAATAATCGTTCTGAAGAGTGGAAGGCGACATGGTGGTTAAACAGATTGATAGGGCGAAAAAAGAAGGTGACGGTAGACTGGCCATATCCTTTTGCTGAGGGCAAGTTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATGTTAGTGTGGATGGGAGGCATGTGACATCCTTTCCCTATCGCACGGGATTTGCTCTTGAGGATGCTACTGGACTATCTATTAATGGGGATGTTGATGTGCACTCTATATTTGCTGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCAGTGGAAAGCTCTTCCTCTTCGCAATATGAATGTGGAGCTTTTCATTGGTATCCTTTCTGCTGGAAACCATTTTGCTGAACGGATGGCAGTGAGGAAGTCCTGGATGCAGCATAAGCTAATCCAATCTTCACATGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATAAATGTGGACATAAAGAAAGAAGCAGAGTATTTTGGTGATATGATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGattcatactgtggcttctaagtatatcatgaaatgtgatgatgacacatttgtcagagtggattctatcataaacgaagcaagacaaattcaaagtagaagtctctacatgggaaatatgaattatcaccacaggcctcttcgccatgggaaatgggctgtaacttatgagGAATGGGTAGAGGAAGAATATCCCATCTATGCTAATGGTCCAGGTTACATAGTCTCAGCTGACATAGCTCAGTTCATTGTATCTGAATTTGAGAAGCGCAAATTAAAATTATTCAAAATGGAGGATGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACAGCACAAGACCAGTGGAGTATGTGCACAACTTGAAGTTCTGCCAATTTGGGTGCTTTGAAGAGTACTACACTGCACACTACCAATCACCAAGACAAATGACATGCATGTGGGAAAAATTGCAACATCAAGGAAAACCACTCTGTTGCAACATGAGATGA 1917 0.4497 MKRGSSKVDPFVLPNRLTLLQIFMVVMLLYLLFISFEIPLAFRAGLGTENGAVFLTDALPMPMPLLLEESHNRVEIRAPRGLKLEKVSTLRFNESFSEGSELHKVARHAWVAGEKLWGEVESFVKIKVENGSDSCPNSVSVSGAGFRDKGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVRDGGEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGHVKCEKWIRDDNNRSEEWKATWWLNRLIGRKKKVTVDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKALPLRNMNVELFIGILSAGNHFAERMAVRKSWMQHKLIQSSHVVARFFVALHARKDINVDIKKEAEYFGDMIIVPYMDHYDLVVLKTIAICEYGIHTVASKYIMKCDDDTFVRVDSIINEARQIQSRSLYMGNMNYHHRPLRHGKWAVTYEEWVEEEYPIYANGPGYIVSADIAQFIVSEFEKRKLKLFKMEDVSMGMWVEQFNSTRPVEYVHNLKFCQFGCFEEYYTAHYQSPRQMTCMWEKLQHQGKPLCCNMR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00363 638 Pfam Galactoside-binding lectin 151 358 IPR001079 GO:0030246
Gma01g00363 638 SMART Gal_bind_lectin_2 154 359 IPR001079 GO:0030246
Gma01g00363 638 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 11 638 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma01g00363 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 152 358 IPR013320 -
Gma01g00363 638 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 11 638 - -
Gma01g00363 638 Pfam Galactosyltransferase 406 585 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma01g00363 638 Gene3D - 190 358 - -
Gma01g00363 638 CDD GLECT 154 358 IPR001079 GO:0030246
Gma01g00363 638 Gene3D - 386 630 - -
Gma01g00363 638 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 150 360 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00363 Gma-Chr1 4385757 4390660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00363 7 638 Glycosyltransferase AT1G74800 59.970 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00363 K20843 - gmx:100803219 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00363 01 4385757 4390660 Gma01g00363 01 4385757 4390660 ECH
Gma01g00363 01 4385757 4390660 Gma02g00228 02 2241583 2246509 GST
Gma01g00363 01 4385757 4390660 Gma17g00141 17 1197079 1197753 PCT
Gma01g00363 01 4385757 4390660 Gma18g01161 18 17308013 17317171 PCT
Gma17g00141 17 1197079 1197753 Gma01g00363 01 4385757 4390660 PCT
Gma18g01161 18 17308013 17317171 Gma01g00363 01 4385757 4390660 PCT