Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00774 ATGGCACCCTCAATTGTTTTGTCTCTACTACCCCTTCTTCTGGTTTCAACTTGTTGTTATGCGCAACCCCTTGAAGAGGGTTTTATCTCTGGGGTCATATCTGACAAGGGTCTTGAATATGCCAAGGAGTTGTTGATAGAGAAAGGTATTGCCTCCATTGTTATGCTTCAGCTGCCAGAGATTGAGAATTCTGCCCAAGTCCCTTTGGTTGGAAATGCTAAAGTGGTTCTTTCTGACATCACAATCAAGGATGTTGAAGTCAATTCTTCATCTGTTAAGACTGGGGAGAGTGGCATTGTTCTAGTGATTTCAGGTGCCATTGCTAATATGAGTATGAGGTGGAGGTACACTGTCAGCTCTTGGTTAATCCCATTTGGAATTTCAGATAGTGGGAATGCTTCAGTGAAGGTTACAGGTATGCAAGTGGGACTCACAGTAAATATAAGGAACCAAGAAGGAACTCTTAAATTGGCTCTCTTAGATTATGGATGTTATGTGGGAGACTTATCTATAAAGTTGGACGGTGGTGCATCTTGGCTTTACCAATTGCTGGTAGATGTTTTTGAAGGGGATATAACATCTGCAGTTGAAGAGGGTATTTCAGAGAAAATAAAAGAAGGGATAATGAATCTTGATCATTTTTTGAAATCTCTTCCAGAGCAGATCTCACTAGACAAAACTGCTGCACTAAATGTTTCTTTTGTTGGCAATCCTGTGTTGAGTAACTCCTCTATTGCTATTGCAATTAATGGTTTATTCACAGGGAAAAATGAAGTTTTAGTACCTCAACGTTACTACCAGAAAGGAATGAAGATTTCTGCTGCCTGTGGTGGTTTACAAAAGATGATAAAGGTTTCAATACATGAAAATGTGTTCAAATCTGCTTCCCTAGTTTACTACAATGCAGGTAAAATGCAATTGATTATTGATGAACTGCCTGATCAGGACATTTTGAACACTGCTGAATGGAGATTCATAGTTCCCCAATTATACAAGCGATATCCAAATGATGACATGCAACTTAATATCTCTATATCTTCTCCACCAGTTATACAAGTGACCTACCAAGACATTGGTGCAACTATTTTTGTAGATATAACGATTGATGTTCTGGAAGACGGTGAAGTCATACCTGTTGCATGCATCTCAGTGGAAATTAGTGCTTCATGTGCTGTGGAAATTGAAGGAAACAATATTGCTGGTTGGCTCAGATTACAAACATTTTCTGCATACTTGAAGTGGAGCAAAATAGGGAAACTGCACGTGCGTCTGATCCAGTCACTAATGTCAAGTGTCCTCAAAACTGTTGTCCTTCCATACCTGAACTTCAAATTAAAGAGAGGATTCCCATTACCAATTATTGATGGTTATGGCTTTCAGAATGCAATTATCTTGTACAATCATCCATGGATTATGGTGTGTAGTGATGTTTCCTTCTTAGAAGATTACTATCTAGGTCAACAGTTAGCTTATGTTTCATAA 1482 0.3873 MAPSIVLSLLPLLLVSTCCYAQPLEEGFISGVISDKGLEYAKELLIEKGIASIVMLQLPEIENSAQVPLVGNAKVVLSDITIKDVEVNSSSVKTGESGIVLVISGAIANMSMRWRYTVSSWLIPFGISDSGNASVKVTGMQVGLTVNIRNQEGTLKLALLDYGCYVGDLSIKLDGGASWLYQLLVDVFEGDITSAVEEGISEKIKEGIMNLDHFLKSLPEQISLDKTAALNVSFVGNPVLSNSSIAIAINGLFTGKNEVLVPQRYYQKGMKISAACGGLQKMIKVSIHENVFKSASLVYYNAGKMQLIIDELPDQDILNTAEWRFIVPQLYKRYPNDDMQLNISISSPPVIQVTYQDIGATIFVDITIDVLEDGEVIPVACISVEISASCAVEIEGNNIAGWLRLQTFSAYLKWSKIGKLHVRLIQSLMSSVLKTVVLPYLNFKLKRGFPLPIIDGYGFQNAIILYNHPWIMVCSDVSFLEDYYLGQQLAYVS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00774 493 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 244 479 IPR017943 GO:0008289
Gma18g00774 493 Pfam LBP / BPI / CETP family, C-terminal domain 280 464 IPR001124 GO:0008289
Gma18g00774 493 SMART bpi2_2 277 476 IPR001124 GO:0008289
Gma18g00774 493 Pfam LBP / BPI / CETP family, N-terminal domain 37 210 IPR017942 GO:0008289
Gma18g00774 493 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 242 IPR017943 GO:0008289
Gma18g00774 493 SMART bpi1_3 33 258 IPR017942 GO:0008289
Gma18g00774 493 PIRSF Lipid_binding_protein 6 483 IPR030675 GO:0005615|GO:0008289
Gma18g00774 493 Gene3D - 36 216 - -
Gma18g00774 493 PANTHER OS06G0309200 PROTEIN 1 493 IPR045897 -
Gma18g00774 493 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 493 - -
Gma18g00774 493 Gene3D - 32 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00774 Gma-Chr18 8600068 8605678 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00774 K05399 - gmx:100815362 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00774 18 8600068 8605678 Gma18g00774 18 8600068 8605678 ECH
Gma18g00774 18 8600068 8605678 Gma08g03011 08 46688613 46694095 GST
Gma18g00774 18 8600068 8605678 Gma14g00164 14 1313777 1318535 PCT
Gma18g00774 18 8600068 8605678 Gma02g02775 02 53352254 53356741 PCT
Gma14g00164 14 1313777 1318535 Gma18g00774 18 8600068 8605678 PCT
Gma02g02775 02 53352254 53356741 Gma18g00774 18 8600068 8605678 PCT