Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03011 ATGGCACTCACTATTGTTTTCTCTCTGCTATCCCTTCTGTTGGTTTCAGCTTGTTGCTATGTGCAACCCCTTGAAGAGAGTTCCATCTCTGGGGTCATATCTGACAAGGGCCTTGAATATGCCAAGGAGTTGTTGATAGAGAAAGTGGTTCTTTCTGACATCACAATCAAGGATGTTCAAGTCAATTCTTCATCTGTTAAGACTGGGGAGAGTGGTGGTATTGTTCTTGTTGTTTCAGGGAAAAATGAAGTTTTAGTACCTCGGGGTTACCAGAAAGGAGTGAAGATTTCTGCTGCCTGTGGTGGTTTACAAAAGATGTTAAAGGTTTCGATACATGAAAATGTGTTCAAATCTGCTTTCCTAGTTTACTACAATGCAGGTAAAAGAAAATTGATTATTGATGAACTGCCTGATCAGAACATTTTGAACACTGCTGAATGGAGATTCATAGTTCCCCAATTATACAAGCGATATCCAAATGATGACATGCAGCTTAATATCTCTATATCTTCTCCACAAGTTATACAAGTGACCTACCAAGATATTGGTGCAACTATTTTTGTAGATATAACAATTGATGTTCTGGAAGACGATGAAGTCATACCTGTTGCATGCATCTCAGTGGAAATTAGTGCTTCAAGTGCTGTGGAAGTTGAAGGAAACAATACTGCTGGTTGGCTCAGATTACAAACATTTTCTGAATACTTGACGTGGAGCAAAATAGGGAAATTGCGTGTGCATCTGATCCAGTCACTAATGTCAAGTGTCCTCAAAACTGTCGTCCTTCCATACCTGAACTTCAAATTAAAGAGAGGATTCCCATTACCAATTATTGATGGTTATGGTGTGTAG 852 0.392 MALTIVFSLLSLLLVSACCYVQPLEESSISGVISDKGLEYAKELLIEKVVLSDITIKDVQVNSSSVKTGESGGIVLVVSGKNEVLVPRGYQKGVKISAACGGLQKMLKVSIHENVFKSAFLVYYNAGKRKLIIDELPDQNILNTAEWRFIVPQLYKRYPNDDMQLNISISSPQVIQVTYQDIGATIFVDITIDVLEDDEVIPVACISVEISASSAVEVEGNNTAGWLRLQTFSEYLTWSKIGKLRVHLIQSLMSSVLKTVVLPYLNFKLKRGFPLPIIDGYGV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03011 283 Gene3D - 45 283 - -
Gma08g03011 283 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 48 80 - -
Gma08g03011 283 SMART bpi2_2 101 283 IPR001124 GO:0008289
Gma08g03011 283 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 78 283 - -
Gma08g03011 283 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 49 - -
Gma08g03011 283 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 104 282 IPR017943 GO:0008289
Gma08g03011 283 PANTHER OS06G0309200 PROTEIN 78 283 IPR045897 -
Gma08g03011 283 PANTHER OS06G0309200 PROTEIN 1 49 IPR045897 -
Gma08g03011 283 PANTHER OS06G0309200 PROTEIN 48 80 IPR045897 -
Gma08g03011 283 Pfam LBP / BPI / CETP family, C-terminal domain 104 278 IPR001124 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03011 Gma-Chr8 46688613 46694095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03011 K05399 - gsj:114421175 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03011 08 46688613 46694095 Gma08g03011 08 46688613 46694095 ECH
Gma18g00774 18 8600068 8605678 Gma08g03011 08 46688613 46694095 GST
Gma08g03011 08 46688613 46694095 Gma14g00164 14 1313777 1318535 PCT
Gma08g03011 08 46688613 46694095 Gma02g02775 02 53352254 53356741 PCT
Gma14g00164 14 1313777 1318535 Gma08g03011 08 46688613 46694095 PCT
Gma02g02775 02 53352254 53356741 Gma08g03011 08 46688613 46694095 PCT