Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02775 ATGGCACCCTCAATTTGTTTTCTTCTTCTATCCCTTCTGTTCCTTTCATCCTCCACAAGTGGTACTGATGAAGAGGGTTTCATCTCTGTGATCATATCTGATAAGGGCCTTGATTTTGCCAAGGATATTCTGATAGACCAAGCTGTTGCCTCTATTGTTCAGTCTCAGCTGCCACAGATTGAGAAGACTGTGCAAGTCCCTCTTGTTGGAAAAGCCAAAGTGGTTCTTTCTGACATCACTATCAATCATATCCAAGTTAATTCTTCATCTGTTAATACTGGAGAGACAGGCATTGCTCTTGTCGTTTCTGGTGCCACTGCCGACTTGAGTTTGAACTGGAGGTACTCTGTTAGCAGTTGGTTAGTCCCAATTGGAATTTCGGACAGTGGAACCGCTACTGTGAAGGTTAATGATTTGCAAGTGGGACTTACTGTGAATTTAAGAAACCAAGAAGGAACTCTTAAGTTGAATCTCCTGGATTCTGGATGTCATGTTAGAGATTTATCTATAAAGTTGCATGGTGGAGCAGCTTGGCTTTATCAAGTGCTAGTAGATGCTTTTGCAGGAAATATAGCATCTGCAGTTGAAGAGGCAATTTCTAAGAAAATAAATGAGGGGATATCAACTCTTGACCTTTTATTGCAATCTCTTCCAAAAACAATCCCATTAGACGAAACTGCTGCTCTAAATGTTTCTTTCATGGACAACCCAGTGCTGAGTGATTCTGCTATTGAATTAGAAATTAATGGTTTATTCACAGGGAGAAATGAAGTTTTGGTACCTCAAGCTTACTACAGAGGATCAGGCCTTTCTCTTTCTGCTTCCTGTGGTGGCAGTTCACCAAAGATGATAACAATTTCATTACATGAAAGTGTTTTCAAATCCGGTTCCATGCTTTACTTCACTGCAGATAGTATGCAATGGATTGTTGATGAACTTCCTGATCAGGCCCTTCTGAACACTGCTGAATGGAGATTCCTTATTCCACAATTATACAAAAAATATCCAAATGACGACATGAATCTTAATATCTCTGTATCTTCTCCACCAGATATACAAGTGACAAACAAAGATGTCAGTGTCAACATTTTCATAGATATAACAATTGATGTTCTGGAAGATGGTGAAGTCATACCTGTTGCATGCATCTCGGTGGATTTTAGTGCCTCTTTTGCTGTGGAAATCTTAGGAAACAATCTTGCTGGTTGGCTTAAATTGAGAAAGTTTTCCACATCCTTGAAATGGAGTAAAATAGGGAAACTGCACATGAATTTGATTCAGTCTGTGACATCAACCGTCCTCAAGACCGTCATCATACCATACCTGAACTCGCAGTTATTGAGAGGAATTCCACTGCCAATTCTTAATGGTTTTGCCATTAAGAATGTTTGTATATTGTATGCTCCCCCTCGGATTACTGTGTGTAGTGATGTTTCTTTCTGA 1443 0.3964 MAPSICFLLLSLLFLSSSTSGTDEEGFISVIISDKGLDFAKDILIDQAVASIVQSQLPQIEKTVQVPLVGKAKVVLSDITINHIQVNSSSVNTGETGIALVVSGATADLSLNWRYSVSSWLVPIGISDSGTATVKVNDLQVGLTVNLRNQEGTLKLNLLDSGCHVRDLSIKLHGGAAWLYQVLVDAFAGNIASAVEEAISKKINEGISTLDLLLQSLPKTIPLDETAALNVSFMDNPVLSDSAIELEINGLFTGRNEVLVPQAYYRGSGLSLSASCGGSSPKMITISLHESVFKSGSMLYFTADSMQWIVDELPDQALLNTAEWRFLIPQLYKKYPNDDMNLNISVSSPPDIQVTNKDVSVNIFIDITIDVLEDGEVIPVACISVDFSASFAVEILGNNLAGWLKLRKFSTSLKWSKIGKLHMNLIQSVTSTVLKTVIIPYLNSQLLRGIPLPILNGFAIKNVCILYAPPRITVCSDVSF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02775 480 Pfam LBP / BPI / CETP family, N-terminal domain 36 210 IPR017942 GO:0008289
Gma02g02775 480 PIRSF Lipid_binding_protein 3 480 IPR030675 GO:0005615|GO:0008289
Gma02g02775 480 SMART bpi1_3 32 257 IPR017942 GO:0008289
Gma02g02775 480 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 243 480 IPR017943 GO:0008289
Gma02g02775 480 SMART bpi2_2 278 476 IPR001124 GO:0008289
Gma02g02775 480 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 480 - -
Gma02g02775 480 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 28 240 IPR017943 GO:0008289
Gma02g02775 480 Gene3D - 35 215 - -
Gma02g02775 480 Gene3D - 29 463 - -
Gma02g02775 480 PANTHER OS06G0309200 PROTEIN 1 480 IPR045897 -
Gma02g02775 480 Pfam LBP / BPI / CETP family, C-terminal domain 280 466 IPR001124 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02775 Gma-Chr2 53352254 53356741 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02775 K05399 - gmx:100807666 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02775 02 53352254 53356741 Gma02g02775 02 53352254 53356741 ECH
Gma14g00164 14 1313777 1318535 Gma02g02775 02 53352254 53356741 GST
Gma18g00774 18 8600068 8605678 Gma02g02775 02 53352254 53356741 PCT
Gma08g03011 08 46688613 46694095 Gma02g02775 02 53352254 53356741 PCT
Gma02g02775 02 53352254 53356741 Gma18g00774 18 8600068 8605678 PCT
Gma02g02775 02 53352254 53356741 Gma08g03011 08 46688613 46694095 PCT