Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00728 ATGGCCACTTGTGTTGATGCCCCAACCCCTCTTTCTCGGAAGCCTAACGGGTCCCAATCCGATGATCATTCCTTCAATTACATGAAATTCTGCCGACCCACTTTCTCTGATCGCGTTCCCTGCATACCCATTTGCAAGAATCGTGACACTGCCTTCACACGCGTGGAGGAGTTTGACACATGTGTGGAGGATAATGATGATATTGAGGTTGAGGTTGTGGAGGGTGTTGATCTTTGGTTGAAGATTCAAGAGGAGGCAAGCTTGAGCCTTCCAAGCAGCACCCTTTTTGACCTTTTCATGGGTGTTTTGGTTGATGATGGAGATGATGACATCGTAGGTGCTGTGAAGGATGATTTGATAGCTGTTAAGGAGAGGGACCCTGCTTGCATAAGTTATGTGCATTGCTTGCTGAATTTCAAGGGTTTTTTGGCATGTCAGGCTCATAGGATTGCTCACAAATTGTGGCTTCAAGGGAGGAAGGTCTTGGCGCTGTTGATTCAGAATAGGGTGTCTGAGGTTTTTGCTGTGGATATTCACCCTGGTGCCAAAATTGGACGTGGGATTTTGCTGGATCATGCAACAGGACTTGTTGTGGGGGAGACTGCAGTTATTGGGAATAATGTGTCAATTTTGCATAATGTGACATTGGGAGGGACTGGTAAGGCAAGTGGGGATAGACACCCTAAGATTGGTGATGGGGTGTTGATAGGTGCAGGGACTTGTATTTTGGGGAACATTAAGATTGGTGATGGAGCTAAGATTGGTGCTTGTTCTGTTGTGTTGAAGGAAGTGCCACCAAGGACTACTGCTGTTGGGAACCCTGCTAGGTTGGTTGGAGGGAAGGATAACCCTATTAAATTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCATGGTCTGATTATGTTATATAG 918 0.4597 MATCVDAPTPLSRKPNGSQSDDHSFNYMKFCRPTFSDRVPCIPICKNRDTAFTRVEEFDTCVEDNDDIEVEVVEGVDLWLKIQEEASLSLPSSTLFDLFMGVLVDDGDDDIVGAVKDDLIAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKEVPPRTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTSWSDYVI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00728 305 Pfam Bacterial transferase hexapeptide (six repeats) 227 261 IPR001451 -
Gma18g00728 305 TIGRFAM cysE: serine O-acetyltransferase 115 276 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gma18g00728 305 MobiDBLite consensus disorder prediction 1 20 - -
Gma18g00728 305 Gene3D Hexapeptide repeat proteins 177 297 - -
Gma18g00728 305 Gene3D serine acetyltransferase, domain 1 71 176 IPR042122 -
Gma18g00728 305 Pfam Serine acetyltransferase, N-terminal 87 147 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma18g00728 305 SUPERFAMILY Trimeric LpxA-like enzymes 111 279 IPR011004 -
Gma18g00728 305 CDD LbH_SAT 174 274 IPR045304 -
Gma18g00728 305 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 236 264 IPR018357 GO:0016740
Gma18g00728 305 PANTHER SERINE ACETYLTRANSFERASE 87 305 - -
Gma18g00728 305 PANTHER SERINE ACETYLTRANSFERASE 1 89 - -
Gma18g00728 305 SMART SATase_N_2_a 78 147 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma18g00728 305 PANTHER SERINE ACETYLTRANSFERASE 87 305 - -
Gma18g00728 305 PANTHER SERINE ACETYLTRANSFERASE 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00728 Gma-Chr18 7718690 7719718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00728 89 303 Miscellaneous Gene Families AT2G17640 54.419 1.34e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00728 K00640 - gmx:606507 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00728 18 7718690 7719718 Gma18g00728 18 7718690 7719718 ECH
Gma18g00728 18 7718690 7719718 Gma08g03048 08 47114099 47115115 GST
Gma18g00728 18 7718690 7719718 Gma14g00135 14 1100251 1101306 PCT
Gma14g00135 14 1100251 1101306 Gma18g00728 18 7718690 7719718 PCT