Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00135 ATGATGAGAAGGCGTTCCCTTGTGACTGCATCACCAAAACAAGGGTCCGTCTTCTTTGTTGGCCACGACAACAACCCAACAATTCATCCTCACACTCACACCCTTCTGACTCCATCACCAAAACAAGTCACAGAAAACCATAATCACTCCAAAACCTTCAAACCCAGTTCCAATCACAACAGGGTCAACACCTTGCACACTGGTTCCACCGTACAACATGTTGAAGCGGATGAGGCCGTTGAACTGGATGTGTTGTGGACGAAGATGCAGGAAGAAGCCAAACTCGATGTCACTGTGGAACCCTTTTTGTCTGATTACTACAACACTTCCATTCTCTCTCACAACTCACTGCAAACCGCGTTGGCCAATCACCTTGCCATGAAACTCAGCAACTCAAGCCTCCCAAGCAGCATACTTTCTGATCTTTTTGTGACGGTTTTGGAGACTGATAAATCCATCATGGATGCTGTGAAGAGTGATCTGAGAGTGGTGAAGGAGCTAGACCCTGCTTGCATAAGCCACGTGCACTGCTTCTTGAACTTCAAAGGCTTTCTGGCGTGCCAGGCTCACAGGGTGGCTCACAAGCTATGGCTTCAGGGAAGGAAGATTCTTGCTGTGACGATTCAGAACCGGGTTTCCCAGGTTTTCGCGGTGGATGTTCATCCGGGGGCTAGGATTGGAAGTGGGATTTTGCTGGATCATGCGACTGGTATTGTGGTGGGAGAGACTGCTGTGATAGGGAACAATGTGCCAATTCTGCATGGTGTCACTTTGGGAGGGACTGGTAAGGTTTCTGGGGACAGGCACCCAAAGATTGGTGATGGGGTGCTGATTGGTGCTGGAACTTGTATCTTGGGGAATATTAAGGTTGGTGATGGGGCCAAGATTGGTGCTGGTTCTGTGGTTATTAAGGATGTTCCTCCAAGGACTACTGTTGTCGGGAACCCAGCAAAGCTGGTAGGAGGGAAGAACAGCTCTGTTAAGTTGGATAAGATTCCTATCTTCACCATGGACCATACTTCACATATTGCTGACTTTTATGATTATTGTGTTTAG 1056 0.4801 MMRRRSLVTASPKQGSVFFVGHDNNPTIHPHTHTLLTPSPKQVTENHNHSKTFKPSSNHNRVNTLHTGSTVQHVEADEAVELDVLWTKMQEEAKLDVTVEPFLSDYYNTSILSHNSLQTALANHLAMKLSNSSLPSSILSDLFVTVLETDKSIMDAVKSDLRVVKELDPACISHVHCFLNFKGFLACQAHRVAHKLWLQGRKILAVTIQNRVSQVFAVDVHPGARIGSGILLDHATGIVVGETAVIGNNVPILHGVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKVGDGAKIGAGSVVIKDVPPRTTVVGNPAKLVGGKNSSVKLDKIPIFTMDHTSHIADFYDYCV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00135 351 Pfam Serine acetyltransferase, N-terminal 85 189 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma14g00135 351 SMART SATase_N_2_a 85 189 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma14g00135 351 Gene3D serine acetyltransferase, domain 1 68 218 IPR042122 -
Gma14g00135 351 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 278 306 IPR018357 GO:0016740
Gma14g00135 351 Gene3D Hexapeptide repeat proteins 219 340 - -
Gma14g00135 351 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 48 350 - -
Gma14g00135 351 TIGRFAM cysE: serine O-acetyltransferase 157 318 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gma14g00135 351 MobiDBLite consensus disorder prediction 42 61 - -
Gma14g00135 351 Pfam Bacterial transferase hexapeptide (six repeats) 269 303 IPR001451 -
Gma14g00135 351 SUPERFAMILY Trimeric LpxA-like enzymes 85 321 IPR011004 -
Gma14g00135 351 CDD LbH_SAT 216 316 IPR045304 -
Gma14g00135 351 PANTHER SERINE ACETYLTRANSFERASE 48 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00135 Gma-Chr14 1100251 1101306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00135 83 347 Miscellaneous Gene Families AT2G17640 51.661 2.11e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00135 K00640 - gmx:100806181 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00135 14 1100251 1101306 Gma14g00135 14 1100251 1101306 ECH
Gma18g00728 18 7718690 7719718 Gma14g00135 14 1100251 1101306 PCT
Gma08g03048 08 47114099 47115115 Gma14g00135 14 1100251 1101306 PCT
Gma14g00135 14 1100251 1101306 Gma18g00728 18 7718690 7719718 PCT
Gma14g00135 14 1100251 1101306 Gma08g03048 08 47114099 47115115 PCT