Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03048 ATGGCCACTTGTGTTGATGCCTCAACCCCTCTTTCTCGGAAACCTAACGGGTCCCAATCCGATGATCATTCCTTTAATTACATGAAATTCTGCCGACCCTCTTTCTCTGATCGCGTTCCCTGCATGCCCATTTGCAAGAATCGCGACACCGCCTTCACACGTGTGGAGGAGTTTGACACACGTGTGGAGAATCATGTTGAGGTTGACGTTGTAGAGGGTGTTGATCTTTGGTTGAAGATTCAAGAGGAAGCAAGGTTAGATGTTGATCAAGAACCAATCTTATCCAGCTACTATTTCAGTTCCATTTTGTCTCACAAATCCTTGGAGAGTGCCTTGGCCAACCACCTCTCCACAAATTTGAGCAGCTTGAGCCTTCCAAGCAGCACCCTTTATGACCTTTTCATGGGTGTTTTTGCCGATGATAATGACATCATAGGTGCTGTCAAAGATGATTTGATAGCTGTTAAGGAGAGGGACCCTGCTTGCATAAGTTATGTGCATTGCTTGTTGAATTTCAAGGGTTTCTTGGCATGCCAGGCTCATAGGATTGCTCACAAATTGTGGCTCCAAGGGAGGAAGGTCTTGGCACTGTTGATTCAGAATAGGGTTTCTGATGTTTTTGCTGTGGATATTCACCCTGGTGCGAAAATTGGACGTGGGATTTTGCTGGATCATGCAACAGGACTTGTTGTGGGGGAGACTGCAGTTATTGGGAATAATGTGTCAATTTTGCATAATGTGACATTGGGAGGGACTGGTAAGGCTAGTGGGGATAGACACCCTAAGATTGGTGATGGGGTGTTGATAGGTGCAGGGACTTGTATTTTGGGGAACATTAAGATTGGTGATGGAGCTAAGATTGGTGCATGTTCTGTTGTGTTGAAGGAAGTGCCACCAAGAACTACTGCTGTTGGGAACCCTGCTAGGTTGGTTGGAGGGAAGGATAACCCTATTAAATTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCATGGTCTGATTATGTTATCTAG 1017 0.4523 MATCVDASTPLSRKPNGSQSDDHSFNYMKFCRPSFSDRVPCMPICKNRDTAFTRVEEFDTRVENHVEVDVVEGVDLWLKIQEEARLDVDQEPILSSYYFSSILSHKSLESALANHLSTNLSSLSLPSSTLYDLFMGVFADDNDIIGAVKDDLIAVKERDPACISYVHCLLNFKGFLACQAHRIAHKLWLQGRKVLALLIQNRVSDVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKEVPPRTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTSWSDYVI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03048 338 Gene3D Hexapeptide repeat proteins 210 330 - -
Gma08g03048 338 TIGRFAM cysE: serine O-acetyltransferase 148 309 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gma08g03048 338 MobiDBLite consensus disorder prediction 1 20 - -
Gma08g03048 338 Gene3D serine acetyltransferase, domain 1 62 209 IPR042122 -
Gma08g03048 338 CDD LbH_SAT 207 307 IPR045304 -
Gma08g03048 338 PANTHER SERINE ACETYLTRANSFERASE 1 338 - -
Gma08g03048 338 SMART SATase_N_2_a 76 180 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma08g03048 338 Pfam Bacterial transferase hexapeptide (six repeats) 260 294 IPR001451 -
Gma08g03048 338 PANTHER SERINE ACETYLTRANSFERASE 1 338 - -
Gma08g03048 338 Pfam Serine acetyltransferase, N-terminal 76 180 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma08g03048 338 SUPERFAMILY Trimeric LpxA-like enzymes 73 312 IPR011004 -
Gma08g03048 338 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 269 297 IPR018357 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03048 Gma-Chr8 47114099 47115115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03048 76 336 Miscellaneous Gene Families AT2G17640 52.490 5.57e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03048 K00640 - gmx:100779106 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03048 08 47114099 47115115 Gma08g03048 08 47114099 47115115 ECH
Gma18g00728 18 7718690 7719718 Gma08g03048 08 47114099 47115115 GST
Gma08g03048 08 47114099 47115115 Gma14g00135 14 1100251 1101306 PCT
Gma14g00135 14 1100251 1101306 Gma08g03048 08 47114099 47115115 PCT