Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00700 ATGTCGGAAAAGGGCCGGCCACTTCCAAAATTTGGTGAATGGGATGTCAATGATCCAACCTCAGCTGAGGGGTTCACAGTGATTTTTAATAAGGCCAGGGATGAGAAAAAGACAGGTGGTAACCCAGATTCACCAGGAAAGACTGCCACTGATCCTCATAGCAAACCTGCTGTAGAGCCTGGCAAAACTCAAACTAAAAAATGGTTTTGCTGCATGCAAAACCCTTCTGCCGAATCATAG 240 0.4583 MSEKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPGKTQTKKWFCCMQNPSAES 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00700 79 MobiDBLite consensus disorder prediction 31 79 - -
Gma18g00700 79 MobiDBLite consensus disorder prediction 1 20 - -
Gma18g00700 79 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Gma18g00700 79 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 78 IPR040387 -
Gma18g00700 79 PANTHER RPM1-INTERACTING PROTEIN 4-LIKE 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00700 Gma-Chr18 7235391 7238754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00700 - - gmx:100305772 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00700 18 7235391 7238754 Gma18g00700 18 7235391 7238754 ECH
Gma18g00700 18 7235391 7238754 Gma08g03076 08 47395155 47398629 GST
Gma18g00700 18 7235391 7238754 Gma02g02816 02 53702631 53703789 PCT
Gma02g02816 02 53702631 53703789 Gma18g00700 18 7235391 7238754 PCT