Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02816 ATGTCGGACACGGGTCGACCACTACCAAAGTTTGGTGAATGGGATGTCAATGATCCAGCTTCAGCTGAAGGCTACACGGTGATTTTCAACAAAGCTAGAAATGACAAAAAGACAGGTGGTGGCAAACCAGAGTCACCTGCAAAGGTTAATCCTCGTACCAGACGACCTCCGTTAGATCCAAGCAAAACACAAAGTAAAAAATGTTTTTGTTGCATACAAAGTCCTCCCGTGGAGTCATAG 240 0.45 MSDTGRPLPKFGEWDVNDPASAEGYTVIFNKARNDKKTGGGKPESPAKVNPRTRRPPLDPSKTQSKKCFCCIQSPPVES 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02816 79 PANTHER PROTEIN NOI4 1 72 - -
Gma02g02816 79 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 72 IPR040387 -
Gma02g02816 79 MobiDBLite consensus disorder prediction 31 66 - -
Gma02g02816 79 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02816 Gma-Chr2 53702631 53703789 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02816 - - gmx:100817111 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02816 02 53702631 53703789 Gma02g02816 02 53702631 53703789 ECH
Gma18g00700 18 7235391 7238754 Gma02g02816 02 53702631 53703789 PCT
Gma08g03076 08 47395155 47398629 Gma02g02816 02 53702631 53703789 PCT
Gma02g02816 02 53702631 53703789 Gma18g00700 18 7235391 7238754 PCT
Gma02g02816 02 53702631 53703789 Gma08g03076 08 47395155 47398629 PCT