Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00359 ATGGCTCACAGCTGCTCTGATGAGGATACTGATATTAGTGAATCTGAAATTAGTGAGTATGAAGATAAATCCTATGAAGAACTGAAAAATGGAAGTCAGGATGTGAGAACATCGGGCAAGACTTTCACTTGCCCCTACTGCCCTAAAAAGAGAAAGCAGGATTATTTATACAAGGAGCTCCTTCAACATGCTTCTGGGGTGGGTCAGAGTAGTTCACAAAAGAGAAAAGCAAGAGACAAGGCTAATCATTTGGCTTTAGTGAAATATTTGAAAAAGGATCTCATGAATGTAGATGTTCCATCAAATGATTCAAAACCGGAAGATGAAAGTGATCCTTCTGTTAATTCTAATGATCAGTTTGTGTGGCCTTGGATTGGAGTTGTAGTTAATATTCCAACTAGACGGACAGAAGATGGACGCTGTGTTGGTGAGAGTGGTTCTAGGCTGAGGGATGAGTACAGAAGCAGGGGTTTCAATCCAGTGCGAGTTAATCCTTTGTGGAATTTCCGGGGTCACTCTGGAACTGCTCTTGTGGAATTCAATAAAAACTGGCCAGGCTTACATAATGCATTGGCATTTGAAAGAGCATACGAATTAGATCATCATGGTAAAAAGGATTGGTTTACTAATTCTGGGCAGAAGTCTGGTCTTTATGCATGGGTTGCCCGGGCAGATGACTACAAGATGAACAGTATTTATGGAGAACATCTGCGAAGGATGGGTGATGTCAAAACCATATCCGAGCTTATGGAAGAAGAAGCTCGGAGGCAAGATAAACTTGTCTCGAATTTAACTAACATTATTCAGGTCAAGAATAAGCACTTAAAAGAGATAGAAGTGAGATGCCACGAGACTACAGATAAAATGAACCTTGTTATGAAGGATAAAGATAAACTCATTCAAGCTTATAATGAAGAGATACAGAAAATACAGTCAAGTGCCAGGGATCACTTCCAAAGGATTTTTACTGACCATGAAAAGCTCAAATTGCAACTGGAATCTCACAAAAATGAGCTTGAGTTACGGAAAGTTGAATTGGAAAAACGTGAGGCACATAACGAAAGTGAAAGAAAAAAGTTGGCAGAAGAAATTGAGGAGAATGCATCGAAAAATACCTCTCTTCAGATGGCTGCTTTAGAGCAAATGAAAGCTGATGAAAATGTTATGAAACTGGCTGAAGATCAAAAGAGGCAAAAAGAACAACTCCATGCTAAAATCATTCAGCTTCAAAAACAACTTGATATGAAACAAGAGCTGGAGTTGGAGATTCAGCAATTAAAAGGTTCATTAAGTGTGCTGAAGCACATGGAAGATGACGAAGATGCAGAAATTCTGAATAAGGTAGATACACTACAAAAGGATTTAAGGGACAAGGAGCAGTCACTTCAAGACTTAGATGCATTGAACCAAACACTAATCATTAAAGAGCGTGAGAGTAATGATGAGTTGCAGGAAGCTCGACAAGCATTGGTTGATGCCATTAAAGAGTTGCAATCTCATGGAAATATTCGTTTGAAGAGAATGGGGGAACTTGATACTAGACCATTCCTTGAAGCAATGAAGCAAAGATATAATGAGGAGGATGCTGAAGAGAGAGCTTCAGAACTGTGTTCATTGTGGGAAGAATATCTAAAGGACCCAGATTGGCATCCATTCAAAGTTATCATGGTTGAAGGAAAAGAAAAGGAAATTATAAATGACGAAGATGGAAGGCTAAAAAGATTGAAAAAGGAAATGGGTGTTGGAGCATATAAAGCGGTCGTGGCAGCTCTGATAGAAATGAATGAATACAATCCAAGTGGGAGGTTCATGGTAAGAGAATTGTGGAACAACGAAGAAGATAGGAGAGCTACATTGGAAGAAGGAATTGAATTCGTGTTAAATCAAACAAAAACAAAAAGAAGGAAAATACATCAAATGGTGGATGATGAATCAGGTGAGAATAGTGAGGAAGTGTCTAGTGTTCGAAGGCCCTCTGCAAGAAAAGATGTATAA 1995 0.3895 MAHSCSDEDTDISESEISEYEDKSYEELKNGSQDVRTSGKTFTCPYCPKKRKQDYLYKELLQHASGVGQSSSQKRKARDKANHLALVKYLKKDLMNVDVPSNDSKPEDESDPSVNSNDQFVWPWIGVVVNIPTRRTEDGRCVGESGSRLRDEYRSRGFNPVRVNPLWNFRGHSGTALVEFNKNWPGLHNALAFERAYELDHHGKKDWFTNSGQKSGLYAWVARADDYKMNSIYGEHLRRMGDVKTISELMEEEARRQDKLVSNLTNIIQVKNKHLKEIEVRCHETTDKMNLVMKDKDKLIQAYNEEIQKIQSSARDHFQRIFTDHEKLKLQLESHKNELELRKVELEKREAHNESERKKLAEEIEENASKNTSLQMAALEQMKADENVMKLAEDQKRQKEQLHAKIIQLQKQLDMKQELELEIQQLKGSLSVLKHMEDDEDAEILNKVDTLQKDLRDKEQSLQDLDALNQTLIIKERESNDELQEARQALVDAIKELQSHGNIRLKRMGELDTRPFLEAMKQRYNEEDAEERASELCSLWEEYLKDPDWHPFKVIMVEGKEKEIINDEDGRLKRLKKEMGVGAYKAVVAALIEMNEYNPSGRFMVRELWNNEEDRRATLEEGIEFVLNQTKTKRRKIHQMVDDESGENSEEVSSVRRPSARKDV 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00359 664 Coils Coil 382 436 - -
Gma18g00359 664 MobiDBLite consensus disorder prediction 97 116 - -
Gma18g00359 664 CDD RRM_like_XS 120 227 IPR005380 GO:0031047
Gma18g00359 664 Coils Coil 325 366 - -
Gma18g00359 664 MobiDBLite consensus disorder prediction 634 664 - -
Gma18g00359 664 MobiDBLite consensus disorder prediction 348 366 - -
Gma18g00359 664 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 50 - -
Gma18g00359 664 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 50 636 - -
Gma18g00359 664 Pfam XS domain 118 228 IPR005380 GO:0031047
Gma18g00359 664 Pfam XS zinc finger domain 44 87 IPR005381 GO:0031047
Gma18g00359 664 Pfam XH domain 506 636 IPR005379 -
Gma18g00359 664 MobiDBLite consensus disorder prediction 1 36 - -
Gma18g00359 664 PANTHER RIBONUCLEASE P SUBUNIT P38 1 50 IPR045177 GO:0080188
Gma18g00359 664 Coils Coil 293 313 - -
Gma18g00359 664 PANTHER RIBONUCLEASE P SUBUNIT P38 50 636 IPR045177 GO:0080188
Gma18g00359 664 Coils Coil 448 500 - -
Gma18g00359 664 Gene3D XS domain 113 283 IPR038588 -
Gma18g00359 664 MobiDBLite consensus disorder prediction 348 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00359 Gma-Chr18 3097510 3126705 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00359 - - gmx:102665742 1186.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00359 18 3097510 3126705 Gma18g00359 18 3097510 3126705 ECH
Gma18g00359 18 3097510 3126705 Gma11g02216 11 37419924 37427424 GST
Gma18g00359 18 3097510 3126705 Gma14g00585 14 5694440 5702395 PCT
Gma18g00359 18 3097510 3126705 Gma02g02345 02 49515344 49522456 PCT
Gma14g00585 14 5694440 5702395 Gma18g00359 18 3097510 3126705 PCT
Gma02g02345 02 49515344 49522456 Gma18g00359 18 3097510 3126705 PCT