Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02345 atggctcactgttctaacaaggataatgacccaagtgcatctcaattaagttggtggtatgtagatatatcttatcaagaactaaaaaagggaagttacaaagtgatgcgctcagatgaaactttcatttgtccgtactgtcctgagagaaaacaggattataagtacagggaactccttaatcatgcttctggggtgggtcggagtagttcagaaaagagaactgcaaaagagaaggctaatcatctggctttagtgaaatatttggaaaaggatcttgtacatatggatgtcccatcaaaacctgtagataaaggtgccaaattattaagcccaggagaaaccataatgcctcactgttcaaacaaggacactgatataagtgcatctcaaataagttggtggtatgtggatacatcttacgaagaactcaaaaacagaagccacaatgtgaaaacctcagatgtgactttcatctgtccatactgccctaggagaaaacaggattatttgtacagggaactcctagaacatgcttatatggtgggtcggagtagttctgaaaagagaagtgccagagagagggccaatcatctcgctttagtgaaatatttggaaaatgatcttattattatggatggcccgccagaacctgtagataaaggtaccaaattaagcctaggacaaactgtagaggctcaatgctctaacaaggagactggtatgagtgcatctccaataaattggtggtatgtagataaattttacaaagaactcaaaaagggaaatcacattgtgcaaacctcagatcagactctctcttgtccatactgccctagaaaaagaaaacgggattatgtgtacagggaacttcttgagcatgcttctggggtgggtcagagtagttcacaaaagagacatgtcagagagaagaccactcatctggctttaatgaaatatttgaaaaatgatctCAAGTATATGAATGATCCATCAAAATCTGTGAATGAATGTAACCCCCCAGTTAACAGGGGGGATCAGAGCAGTTCACAAGAGAGAAGTGTCAGAGAAGACGCTACTCATCTGCCTTCAGTGAAATACTTGAAAAAGGATCTTACAAATGTGAGTGGTCCATCATCAAAACCTGTAAATGAAGGAACCATAACAGTAAGCCCAGGAGAAACTGTAATTGGTTGCTGCTCTAACAAAGATAGTAATATAAGTTCATCTCAAATTGTGTGGTATGCAGAAAATTTTTATGAAGAACTCAAAAGGGGGATACACAATGTGAAAACCTCAGATGAGACTTTCAGGTGCCCATACTGCCCTAATAAAAAGATAAACCGGGATTATGCGTACAGGGAAATCCTTGAACATGCTTCGGGGGTGGGTCAGAGTAAGTCTCAAAAAAGAAGTTTCATCGAAAAGGCCAATCATCTGGCTTTAGTAAAATATTTGAAAAGGGATCTTATGAATGTGGGTGCTCCATGTCCATCAAAACCTATGGATCAAGGCACCAAAACAATAAGCCCAGGAGAAACTTTAATGGGTCAATACTCTCATAAAGACAATAATATAAGGGAATCTCAAATAAGTGGGTGGTATGTACATAAATCCTATGAAGCACTCAAAAAGGGAAGCCACAACGTGAAAACCTCAGAAATGACTTTCTCTTGTCCATACTGCCCCAATAAGAAGAGAAAACGTGATTATCTGTACAGGGAAATCCTTGAACATGCTTCCGGGGTGGGTCAGAGTAGCTCAGAAAAGAGAAGTGCCATTGAAAAGGCTAATCATCTTGCTTTAATAAAATATTTGGAAAAAGATCTTATGATTGTGGATGGTCCACCAAAAACTGCAGATGAAGGCAGTCCTCCTTTCAATTTTGAGAAGCAGTTTGTGTGGCCATGGACTGGGGTTGTGGTTAATATTCCTACTAGACTGACAGAGGACGGACGTTGTGTTGGGGAAAGTGGTTCCAAGCTGAGGGATGAATACCGAAGTAGGGGATTTAATCCAAGAAGAGTCCGCATTCTTTCAAATTTCTGTGTCCACTCTGGAACTGCAGTTGTGGAATTCAATAAAAATTGGACAGGGTTAGATAATGCTTTAGCATTTGAAAGAGCATATGAATTAGATCATCATGGGAAAAAAGACTGGTTTGCTAATACACAGCATAAGTCTGGTATTTATGCATGGATTGCTCAAGCTGATGACTACAAGATGAACAATATCATTGGGGAACAACTGCGGAAGATGGTGGATATCAAAACAATATCTGAACTTATGGAAGAAGAAGCTCGGACGCAGGATAAACTTGTGTCCAACTTGAATAACACTCTTCAGGTCAAGAAGAAGCGATTAAAGGAAATGGAAGTAAAATATTATGAGACTTCACGTCGTATGGACATTGTAATGGGGGAAATAGATAAGCTCACTCAAGGTCACAATCAAGAGATGAAGAAAATACAGTCAAGTGCAACTCAACACTTCCAGAATATTTTTAATGGTCATGAAAGGCTTAAGTTGCAACTAGAATCTCAGAAAAGAGAGCTTGAGTTGCGGAGAATTGAATTGGAAAAACGTGAGGCACGTAACGAAAGTGAAAGAAAAAAGTTGGAAGAAGAGATTATGGAGaatgcattgaaaaatagctctcttgacatggctgttctggagcaacagaaagctggtgaaaatgttttgaaactggctgcagatcaaaagcggcaaaaagaacaatttcatgctaaaataatcctgcttgaaagacaactggaagtgaaacaaaaactagaattggagattcaacaactgaaaggaaaattaaatgtcatggcgcacatagaagatgatggggactcagaagttttgaataaggtggatgctttacataaggatttaagagaaaaggaacagtcactacgagacttggattccctgaaccaaacactgattattaaagagcgtcagagcaatgatgagctacaggaagctcgaaaagaattgatTAATGGCATTAAAGAGATATCTTGTCGTGCTAATGTTGGTGTGAAGAGAATGGGGGAGCTTGATATTAGACCATTCCTTGAAGCTATGAAGATAAAATATAATAATGAGGATGCAGAAGATAGAGCTTCAGAACTGTGTTCGTTGTGGGAAGAGTATATAAGGGACCCAGACTGGCATCCATTTAAAATTACCATAATTGAAGGGAAACATCAGGAAATCATAGATGATGAAGATGAAAAGTTGAAGGGACTGAAAAATGAGATGGGTGAAGGAGTCTACAAAGCTGTGGTGACAGCTTTGACAGAGATAAATACATATAATCCAAGTGGGCGGCCGCCGGAATAA 3357 0.2359 MAHCSNKDNDPSASQLSWWYVDISYQELKKGSYKVMRSDETFICPYCPERKQDYKYRELLNHASGVGRSSSEKRTAKEKANHLALVKYLEKDLVHMDVPSKPVDKGAKLLSPGETIMPHCSNKDTDISASQISWWYVDTSYEELKNRSHNVKTSDVTFICPYCPRRKQDYLYRELLEHAYMVGRSSSEKRSARERANHLALVKYLENDLIIMDGPPEPVDKGTKLSLGQTVEAQCSNKETGMSASPINWWYVDKFYKELKKGNHIVQTSDQTLSCPYCPRKRKRDYVYRELLEHASGVGQSSSQKRHVREKTTHLALMKYLKNDLKYMNDPSKSVNECNPPVNRGDQSSSQERSVREDATHLPSVKYLKKDLTNVSGPSSKPVNEGTITVSPGETVIGCCSNKDSNISSSQIVWYAENFYEELKRGIHNVKTSDETFRCPYCPNKKINRDYAYREILEHASGVGQSKSQKRSFIEKANHLALVKYLKRDLMNVGAPCPSKPMDQGTKTISPGETLMGQYSHKDNNIRESQISGWYVHKSYEALKKGSHNVKTSEMTFSCPYCPNKKRKRDYLYREILEHASGVGQSSSEKRSAIEKANHLALIKYLEKDLMIVDGPPKTADEGSPPFNFEKQFVWPWTGVVVNIPTRLTEDGRCVGESGSKLRDEYRSRGFNPRRVRILSNFCVHSGTAVVEFNKNWTGLDNALAFERAYELDHHGKKDWFANTQHKSGIYAWIAQADDYKMNNIIGEQLRKMVDIKTISELMEEEARTQDKLVSNLNNTLQVKKKRLKEMEVKYYETSRRMDIVMGEIDKLTQGHNQEMKKIQSSATQHFQNIFNGHERLKLQLESQKRELELRRIELEKREARNESERKKLEEEIMENALKNSSLDMAVLEQQKAGENVLKLAADQKRQKEQFHAKIILLERQLEVKQKLELEIQQLKGKLNVMAHIEDDGDSEVLNKVDALHKDLREKEQSLRDLDSLNQTLIIKERQSNDELQEARKELINGIKEISCRANVGVKRMGELDIRPFLEAMKIKYNNEDAEDRASELCSLWEEYIRDPDWHPFKITIIEGKHQEIIDDEDEKLKGLKNEMGEGVYKAVVTALTEINTYNPSGRPPE 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 233 280 - -
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 347 386 - -
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 516 565 IPR045177 GO:0080188
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 448 507 - -
Gma02g02345 1118 Coils Coil 922 949 - -
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 166 223 - -
Gma02g02345 1118 Pfam XS domain 630 741 IPR005380 GO:0031047
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 281 344 - -
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 400 446 - -
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 51 - -
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 566 1115 IPR045177 GO:0080188
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 117 167 IPR045177 GO:0080188
Gma02g02345 1118 CDD RRM_like_XS 633 740 IPR005380 GO:0031047
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 516 565 - -
Gma02g02345 1118 Coils Coil 961 1013 - -
Gma02g02345 1118 MobiDBLite consensus disorder prediction 331 349 - -
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 566 1115 - -
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 117 167 - -
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 166 223 IPR045177 GO:0080188
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 281 344 IPR045177 GO:0080188
Gma02g02345 1118 Pfam XS zinc finger domain 275 317 IPR005381 GO:0031047
Gma02g02345 1118 Pfam XS zinc finger domain 44 86 IPR005381 GO:0031047
Gma02g02345 1118 Pfam XS zinc finger domain 559 602 IPR005381 GO:0031047
Gma02g02345 1118 Pfam XS zinc finger domain 160 202 IPR005381 GO:0031047
Gma02g02345 1118 Pfam XS zinc finger domain 439 483 IPR005381 GO:0031047
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 400 446 IPR045177 GO:0080188
Gma02g02345 1118 Pfam XH domain 1019 1115 IPR005379 -
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 233 280 IPR045177 GO:0080188
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 347 386 IPR045177 GO:0080188
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 50 108 IPR045177 GO:0080188
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 448 507 IPR045177 GO:0080188
Gma02g02345 1118 Gene3D XS domain 627 795 IPR038588 -
Gma02g02345 1118 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 50 108 - -
Gma02g02345 1118 Coils Coil 774 794 - -
Gma02g02345 1118 MobiDBLite consensus disorder prediction 331 361 - -
Gma02g02345 1118 Coils Coil 835 881 - -
Gma02g02345 1118 PANTHER RIBONUCLEASE P SUBUNIT P38 1 51 IPR045177 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02345 Gma-Chr2 49515344 49522456 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02345 - - gmx:100806426 2251.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02345 02 49515344 49522456 Gma02g02345 02 49515344 49522456 ECH
Gma14g00585 14 5694440 5702395 Gma02g02345 02 49515344 49522456 GST
Gma18g00359 18 3097510 3126705 Gma02g02345 02 49515344 49522456 PCT
Gma11g02216 11 37419924 37427424 Gma02g02345 02 49515344 49522456 PCT
Gma02g02345 02 49515344 49522456 Gma18g00359 18 3097510 3126705 PCT
Gma02g02345 02 49515344 49522456 Gma11g02216 11 37419924 37427424 PCT