Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02216 atggctcacagcagctctgatgaggatactgatattagtgaatctgaaattagtgagtatgaagataaatcctatgaagaactgaaaagtggaagccaggatgtgaaaacatcggatgagactttcacttgtccctactgccctaaaaagagaaaacgggattatttatacaaggagctccttcaacatgcttctggggtgggtcagagtagttcccaaaagagaaaagcaagagacaaggctaatcatttggctttactgaaatatttggaaaaggatctCATGAATGTAGATGTTCCATCAAATGATTCAAAACCTGAAGATGAAAGTGATCCTTCTGTTAATTCTAATGATCAGTTTGTGTGGCCTTGGATTGGAGTTGTAGTTAATATTCCAACTAGACGGACAGAAGATGGACGCTGTGTTGGTGAGAGCGGTTCCAGGCTGAGGGATGAGTACAGAAGCAGGGGTTTCAATCCATTTCGAGTCAATCCTTTGTGGAATTTCCGTGGCCACTCTGGAACTGCTCTTGTGGAATTCAATAAAAACTGGCCAGGCTTACATAATGCATTGGCATTTGAAAGAGCATATGAATTAGATCATCATGGAAAAAAGGATTGGTTTACTAATTCTGGGCTGAAGTCTGGCCTTTATGCATGGGTTGCCCGGGCAGATGACTACAAGATCAATAGTATCTATGGAGAACATCTGCGAAGGATGGGCGATGTCAAAACCATATCTGAGCTTATGGAAGAAGAAGCTCGAAGGCAAGATAAGCTTGTCTCGAATTTAACTAACATTATTCAGGTAAAAAATAAGCACTTAAAAGAGATAGAAGTGAGATGCCACGAGACTACAGACAAAATGAACCTTGTTATGAAGGATAAAGATCAACTCATTCAAGCTTATAATGAAGAGATACAGAAAATACAGTTAAGTGCCAGGGATCACTTCCAAAGGATTTTTACTGACCATGAAAAGCTCAAATTGCAACTGGAATCTCACAAAAATGAGCTTGAGTTGCGGAAAGTTGAATTGGAAAAACGCGAAGCACATAACGAAAGTGAAAGGAAAAAGTTGGCAGAGGAAATTGAGGAGAATGCATCGAAAAATAGCTCTCTTCAGATGGCTGCTTTAgagcaaatgaaagctgatgaaaatgttatgaaactggctgaagatcaaaagaggcaaaaagaacaactccatgctaaaatcattcagcttcaaaaacaacttgatgtgaaacaagagctggagttggagattcagcaattaaaaggttcattaagtgtgttgaagcacatggaagatgacgaagatgctgaaattctgaacaaggtagatacactacaaaaggatttaagagacaaggagcagtcacttcaagacttagatgcattgaaccaaacactaatcattaaagagcgcgagagtaatgatgagctgcaggaagctcgACAGGCATTGGTTGATGCCATTAAAGAGTTACAATCTCATGGAAATATTCGTTTGAAGAGAATGGGGGAACTTGATACTAGACCATTCCTTGAAGCAATGAAGCAAAGATATAATGAGGAGGATGCTGAAGAGAGAGCTTCAGAGCTGTGTTCATTGTGGGAAGAATATCTAAAGGACCCAGATTGGCATCCATTCAAAGTTATCATGGTTGAAGGAAAAGAAAAGGAAATTATTAGAGATGACGATGAAAAGCTGAATGGGTTGAAAAATGACTTGGGTGAAGGGGCATATAAAGCAGTGGTGGAAGCTTTGTTGGAAATAAATGAACATAATCCTAGTGGGCGATACTTAACCTCGGTGTTATGGAACTATAAACAAGGAAGAAGAGCAACTCTGAAAGAAGGAGTACAATTTATATCGAATCAATGGAAAGTCCTTAAACGCAAGAAGGGAATGACATGA 1923 0.2709 MAHSSSDEDTDISESEISEYEDKSYEELKSGSQDVKTSDETFTCPYCPKKRKRDYLYKELLQHASGVGQSSSQKRKARDKANHLALLKYLEKDLMNVDVPSNDSKPEDESDPSVNSNDQFVWPWIGVVVNIPTRRTEDGRCVGESGSRLRDEYRSRGFNPFRVNPLWNFRGHSGTALVEFNKNWPGLHNALAFERAYELDHHGKKDWFTNSGLKSGLYAWVARADDYKINSIYGEHLRRMGDVKTISELMEEEARRQDKLVSNLTNIIQVKNKHLKEIEVRCHETTDKMNLVMKDKDQLIQAYNEEIQKIQLSARDHFQRIFTDHEKLKLQLESHKNELELRKVELEKREAHNESERKKLAEEIEENASKNSSLQMAALEQMKADENVMKLAEDQKRQKEQLHAKIIQLQKQLDVKQELELEIQQLKGSLSVLKHMEDDEDAEILNKVDTLQKDLRDKEQSLQDLDALNQTLIIKERESNDELQEARQALVDAIKELQSHGNIRLKRMGELDTRPFLEAMKQRYNEEDAEERASELCSLWEEYLKDPDWHPFKVIMVEGKEKEIIRDDDEKLNGLKNDLGEGAYKAVVEALLEINEHNPSGRYLTSVLWNYKQGRRATLKEGVQFISNQWKVLKRKKGMT 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02216 640 Coils Coil 382 436 - -
Gma11g02216 640 MobiDBLite consensus disorder prediction 97 116 - -
Gma11g02216 640 CDD RRM_like_XS 120 227 IPR005380 GO:0031047
Gma11g02216 640 Coils Coil 325 366 - -
Gma11g02216 640 MobiDBLite consensus disorder prediction 1 47 - -
Gma11g02216 640 MobiDBLite consensus disorder prediction 348 366 - -
Gma11g02216 640 MobiDBLite consensus disorder prediction 348 371 - -
Gma11g02216 640 Gene3D XS domain 113 283 IPR038588 -
Gma11g02216 640 Pfam XS domain 118 228 IPR005380 GO:0031047
Gma11g02216 640 MobiDBLite consensus disorder prediction 17 34 - -
Gma11g02216 640 Coils Coil 293 313 - -
Gma11g02216 640 Coils Coil 448 500 - -
Gma11g02216 640 PANTHER RIBONUCLEASE P SUBUNIT P38 1 50 IPR045177 GO:0080188
Gma11g02216 640 PANTHER RIBONUCLEASE P SUBUNIT P38 50 639 IPR045177 GO:0080188
Gma11g02216 640 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 50 639 - -
Gma11g02216 640 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 50 - -
Gma11g02216 640 Pfam XH domain 506 636 IPR005379 -
Gma11g02216 640 Pfam XS zinc finger domain 44 86 IPR005381 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02216 Gma-Chr11 37419924 37427424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02216 - - gmx:100812353 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02216 11 37419924 37427424 Gma11g02216 11 37419924 37427424 ECH
Gma18g00359 18 3097510 3126705 Gma11g02216 11 37419924 37427424 GST
Gma11g02216 11 37419924 37427424 Gma14g00585 14 5694440 5702395 PCT
Gma11g02216 11 37419924 37427424 Gma02g02345 02 49515344 49522456 PCT
Gma14g00585 14 5694440 5702395 Gma11g02216 11 37419924 37427424 PCT
Gma02g02345 02 49515344 49522456 Gma11g02216 11 37419924 37427424 PCT