Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00354 ATGCCTTTCATCTCCAAAATTCAGCGCCAATCCGATTACACCCTCTTTGGTTCCGCCACTCCCATCGTCATCGACAATGGCGCCTCCTATTTCCGCATTGGATGGGCAGGAGAGACTCAACCCCGTGTTGTTTTCCGCAACATTGTCCAAAGGCCACGCCACAAAACAACCGGAGAAACCGTCACTATTGTTGGTGACCATGATCCAGCATTACTGAAATACTTTGACTGTACACGCTCTGGACCCCGCTCAGCATTTGACAGCAATGTTGTTTACCAGTTTGAAATAATGGAATATATTCTGGACTTTGGATTTGACCGGTTGGGTGCTACAGGATCAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTATGCAACCCAGTTCAGTCTCGTAGTAAAATGGGAGAACTTCTTTTTGAGACTTATGGAGTTCCATCTATAGCCTTTGGTGTTGACGCGGCATTCAGCTATAAATATAATCAACAGCAAGGTGTTTGTGATAAAGATGGTCTTGCAATGTGTCCTGGATTCAATACAACTCATGTGATTCCGTTTGTAGATGGGGAGCCTATTTATAAAGGATGCTGTCGCACCAATATTGGTGGATTCCATGTGACCGATTATTTAAAACAACTTCTTTCACTCAAATATCCTTATCATATGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTATATTGCCCCAGACTATGCTTCTGAAGCTCGGCTGTTTCAGAAAGGAGCTAAAGAGGCCGAAGAAAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCACCCCCAACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAGACAAGGGCAAAGATTACGAGAAATGGCTGAGGCAAAGAGGTCATCTAGAATAAACGAATTGGAAAATGAATTGCATGGTTTGGAATTTCTTTTAAAACAGCTTGAACAAGTTGAAGACAGTAATGTTCCGTCTTTCCTAGCAGCAACTGGTTATGTCTCTAGGCAGGAGATAGAATCTGCCCGCACTAAAGTTACACAATCCTTACGGAAAGCAAAAGGTGAACCAAAGAACGAGCAAGCTGAAACTGATAAGGCCAGCCCTAATGCTAATGAAAAGTATTCTCTTATAAACATCCCTGATGACATGCTCACAACAGACCAGCTCATTGAAAAGAAGAAACAGTTATCACTGAAATCCATGTCTGAAGGGCGGCAGCGATTAAAACAGAAGCGTTATGAAGAGGAATTGGAGCGAGAAAGGAAACAACAGCTAGAGGATGAGAAACGCCTAGAGAATCCAGAGCTTTACTTGGAACAATTGCATGCTAGATACAAAGACCTTTCAGAGAAAGTTGACCAACGAAAACGGCTCAAGACAAATGGAGGTCATTCTAATGGAAATAACTTATCCGGTGGCATTGGTCGTGGTGAGAGACTCAATGCTGCTCAAAGGGAGAGAATGCGCCTCTTGACAACTGCTGCCTTTGATCGCGGCAAGGGTGAGGATACATTTGGTGCCAAAGATGAAGATTGGCAACTTTACAAATTGATGGGCAAAGATAATGATGATGGTGATGAGGAACCAGATGAGGATGATGCAGAGCTAGCCCGCATCTCTTCAAGGCTACTGGACTTGGATCCAACATTTGTGCCCAACAAGTCAGAAACAGGTAGCTCTCAACCTGCCGAGGCACCACGTGCCCGCCCTCTCACCAAAGAAGATTTTCAGATTGTTTTTGGTGTTGAAAGGTTCAGGTGCCCCGAAATTTTGTTCAATCCAAACTGGATTGCGGTTGATCAGGCAGGGTTAGATGAGATGGCTGGGGTCTCAATAAGAAGGTTATCATGTAAGGATGAAAGCCTGGAAGAGAGACTCACTAGCTCCATACTTGTGACTGGTGGAAGTTCTCTTTTCCCCGGCATCATTGAACGCCTTGAAGCCGGAATTCGGATGATTCGGCCATGTGGAGCACCCATAAAAGTAGTTAGAGCACTGGATCCTGTTATGGATGCATGGCGTGGGGCTGCAGCGTTCGCATCAGCCCCACAATTCCATACACAAACTTTCAGTAGGATGGATTATTTCGAAAAGGGTGAAGACTGGCTCCGCAGTTATCAGATTAAATACTCATTGTAA 2172 0.4457 MPFISKIQRQSDYTLFGSATPIVIDNGASYFRIGWAGETQPRVVFRNIVQRPRHKTTGETVTIVGDHDPALLKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFGFDRLGATGSEIDHPVLITECVCNPVQSRSKMGELLFETYGVPSIAFGVDAAFSYKYNQQQGVCDKDGLAMCPGFNTTHVIPFVDGEPIYKGCCRTNIGGFHVTDYLKQLLSLKYPYHMARFTWEKVEDLKMEHCYIAPDYASEARLFQKGAKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENELHGLEFLLKQLEQVEDSNVPSFLAATGYVSRQEIESARTKVTQSLRKAKGEPKNEQAETDKASPNANEKYSLINIPDDMLTTDQLIEKKKQLSLKSMSEGRQRLKQKRYEEELERERKQQLEDEKRLENPELYLEQLHARYKDLSEKVDQRKRLKTNGGHSNGNNLSGGIGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMGKDNDDGDEEPDEDDAELARISSRLLDLDPTFVPNKSETGSSQPAEAPRARPLTKEDFQIVFGVERFRCPEILFNPNWIAVDQAGLDEMAGVSIRRLSCKDESLEERLTSSILVTGGSSLFPGIIERLEAGIRMIRPCGAPIKVVRALDPVMDAWRGAAAFASAPQFHTQTFSRMDYFEKGEDWLRSYQIKYSL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00354 723 MobiDBLite consensus disorder prediction 559 580 - -
Gma18g00354 723 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Gma18g00354 723 Gene3D - 18 170 - -
Gma18g00354 723 SMART actin_3 19 719 IPR004000 -
Gma18g00354 723 Coils Coil 449 469 - -
Gma18g00354 723 SUPERFAMILY Actin-like ATPase domain 19 159 IPR043129 -
Gma18g00354 723 PANTHER ACTIN-RELATED PROTEIN 5 12 715 IPR027664 -
Gma18g00354 723 Coils Coil 309 329 - -
Gma18g00354 723 MobiDBLite consensus disorder prediction 468 487 - -
Gma18g00354 723 Pfam Actin 588 715 IPR004000 -
Gma18g00354 723 Pfam Actin 19 363 IPR004000 -
Gma18g00354 723 Gene3D Actin; Chain A, domain 4 203 284 - -
Gma18g00354 723 Gene3D - 589 678 - -
Gma18g00354 723 MobiDBLite consensus disorder prediction 355 380 - -
Gma18g00354 723 SUPERFAMILY Actin-like ATPase domain 171 716 IPR043129 -
Gma18g00354 723 Coils Coil 419 441 - -
Gma18g00354 723 PANTHER ACTIN 12 715 IPR004000 -
Gma18g00354 723 MobiDBLite consensus disorder prediction 355 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00354 Gma-Chr18 3043079 3048534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00354 589 710 Miscellaneous Gene Families AT2G42100 33.607 2.04e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00354 K11672 - gmx:100808396 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00354 18 3043079 3048534 Gma18g00354 18 3043079 3048534 ECH
Gma18g00354 18 3043079 3048534 Gma11g02221 11 37491407 37497128 GST
Gma18g00354 18 3043079 3048534 Gma14g00582 14 5668484 5672665 PCT
Gma18g00354 18 3043079 3048534 Gma02g02348 02 49539754 49545560 PCT
Gma14g00582 14 5668484 5672665 Gma18g00354 18 3043079 3048534 PCT
Gma02g02348 02 49539754 49545560 Gma18g00354 18 3043079 3048534 PCT