Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02221 ATGCCTTTCATCTCCAAAATTCAGCGCCAAACCGATTACACCCTCTTTGGTTCCGCCACTCCCATCGTCATCGACAATGGCGCCTCCTATTTCCGCATTGGATGGGCAGGAGAGACTCAACCCCGTGTTGTTTTCCGCAACATTGTCCAAAGGCCACGCCACAAAACCACCGGAGAAACTGTCACTATTGTTGGTGACCATGATCCAGCATTACTGAAATACTTTGACTGTACTCGCTCTGGACCCCGCTCAGCATTTGACAGCAATGTTGTTTACCAGTTTGAAATAATGGAATATATTCTGGACTTTGGATTTGACAGGTTGGGTGCTACAGGATCAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTAAGCAACCCAGTTCAGTCTCGTAGTAAGATGGGAGAACTTCTTTTTGAGACTTATGGAGTTCCATCTATAGCCTTTGGTGTTGATGCGGCATTTAGCTATAAATATAATCAACAACAAGGTGTTTGTGATAAAGATGGTCTTGCTATGTGTCCTGGATTCAATACAACTCATGTGATTCCGTTTGTAGATGGGGAGCCTATTTATAAAGGATGCTGTCGTACTAATATTGGTGGATTCCATGTGACTGATTATTTAAAGCAACTTCTTTCACTCAAATATCCTCATCATATGACTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTATATTGCACCAGACTATGCTTCTGAAGCTCGGTTGTTTCTGAAAGGAGCTAGGGAGGCTGAAGAAAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCACCCCCAACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAGACAAGGTCAAAGATTACGAGAAATGGCTGAGGCAAAGAGGTCATCTAAAATAAACGAATTGGAAAATGAATTGCATGGTTTGGAATTTCTTTTAAAACAGCTTGAGCAAGTTCAAGACAGTAATGTTCCGTCTTTCCTAGCAGAGACCGGTTATGTCTCTAGGCAGGAGATAGAATCTGCCCGTACTAAAGTTACACAATCCTTACGGAAAGCAAAAGGTGAACCAAAGAATGAACAAGCTGAAACTGATAAAGCCAGCCCTAATGCTAATGAAAAGTATTCTCTTATAAACATCCCTGATGACATGCTCACCCCAGACCAGCTCATTGAAAAGAAGAAACAGTTATCACTGAAATCCATGTCTGAAGGGCGGCAACGATTAAAACAGAAGCGTTATGAAGAGGAATTGGAGCGACAAAGGAAACAACTGCTAGAGGAGGAGACACGCTTAGAGAACCCAGAGCTTTACTTGGAACAATTGCGTGCTAGATACAAAGACCTTTCAGTGAAAGTTGACCAACGAAAACGGCTCAAGACAAATGGAGGTCATTCTAACGGAAATAACTTGGCCGGTGCCATTGGTCGTGGTGAGAGACTCAATGCTGTTCAAAGGGAGAGAATGCGCCTCTTGACAACTGCTGCCTTTGATCGCGGCAAGGGTGAGGATACATTTGGTGCCAAAGATGAAGATTGGCAACTTTACAAATTGATGAGCAAAGATATTGATGATGGTGATGAGGGACCAGATGAGGATGATGCAGAGCTAGCCCGCATCTCTTCAAGGCTACAGGACTTGGATCCAACATTTGTGCCCAACAAGTCAGAAGCAGGTAGCTCTCAACCTGCTGCTGAGGCCCAACGCGCCCGTCCTCTCACCAAAGAAGATTTTCAGATTGTTTTTGGTGTTGAAAGGTTCAGGTGCCCCGAAATTTTGTTCAATCCAAACTGGATTGCGGTTGATCAAGCAGGGTTACACGAGATGGCTGGGGTCTCAATAAGAAGGTTATCATGTAAGGATGAAGGCCTGGAAGAGAGACTCACTAGCTCCATACTTGTGACTGGTGGAAGTTCTCTTTTCCCCGGCATCACTGAACGCCTCGAAGCCGGAATCCGGATGATTCGACCATGTGGAGCACCAATAAAAGTTGTTAGAGCACTGGATCCTGTTATGGATGCATGGCGTGGGGCTGCAGCGTTTGCATCTGCCCCACAATTCCATACACAAACTTTCAGTAGGATGGATTATTTCGAAAAGGGTGAAGATTGGCTCCGCAATTATCAGATTAAATATTCATCGTAA 2175 0.4437 MPFISKIQRQTDYTLFGSATPIVIDNGASYFRIGWAGETQPRVVFRNIVQRPRHKTTGETVTIVGDHDPALLKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFGFDRLGATGSEIDHPVLITECVSNPVQSRSKMGELLFETYGVPSIAFGVDAAFSYKYNQQQGVCDKDGLAMCPGFNTTHVIPFVDGEPIYKGCCRTNIGGFHVTDYLKQLLSLKYPHHMTRFTWEKVEDLKMEHCYIAPDYASEARLFLKGAREAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSSKINELENELHGLEFLLKQLEQVQDSNVPSFLAETGYVSRQEIESARTKVTQSLRKAKGEPKNEQAETDKASPNANEKYSLINIPDDMLTPDQLIEKKKQLSLKSMSEGRQRLKQKRYEEELERQRKQLLEEETRLENPELYLEQLRARYKDLSVKVDQRKRLKTNGGHSNGNNLAGAIGRGERLNAVQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSKDIDDGDEGPDEDDAELARISSRLQDLDPTFVPNKSEAGSSQPAAEAQRARPLTKEDFQIVFGVERFRCPEILFNPNWIAVDQAGLHEMAGVSIRRLSCKDEGLEERLTSSILVTGGSSLFPGITERLEAGIRMIRPCGAPIKVVRALDPVMDAWRGAAAFASAPQFHTQTFSRMDYFEKGEDWLRNYQIKYSS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02221 724 MobiDBLite consensus disorder prediction 558 581 - -
Gma11g02221 724 Gene3D - 152 206 - -
Gma11g02221 724 PANTHER ACTIN 13 716 IPR004000 -
Gma11g02221 724 Gene3D Actin; Chain A, domain 2 49 85 - -
Gma11g02221 724 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Gma11g02221 724 Gene3D - 22 150 - -
Gma11g02221 724 SUPERFAMILY Actin-like ATPase domain 171 717 IPR043129 -
Gma11g02221 724 PANTHER ACTIN-RELATED PROTEIN 5 13 716 IPR027664 -
Gma11g02221 724 Gene3D - 684 712 - -
Gma11g02221 724 Gene3D Actin; Chain A, domain 4 207 251 - -
Gma11g02221 724 Coils Coil 449 469 - -
Gma11g02221 724 Coils Coil 418 441 - -
Gma11g02221 724 Gene3D Actin; Chain A, domain 4 584 613 - -
Gma11g02221 724 SMART actin_3 19 720 IPR004000 -
Gma11g02221 724 Gene3D - 614 683 - -
Gma11g02221 724 MobiDBLite consensus disorder prediction 355 381 - -
Gma11g02221 724 Coils Coil 309 329 - -
Gma11g02221 724 SUPERFAMILY Actin-like ATPase domain 19 159 IPR043129 -
Gma11g02221 724 Pfam Actin 589 716 IPR004000 -
Gma11g02221 724 Pfam Actin 19 358 IPR004000 -
Gma11g02221 724 MobiDBLite consensus disorder prediction 355 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02221 Gma-Chr11 37491407 37497128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02221 590 711 Miscellaneous Gene Families AT2G42100 34.426 1.18e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02221 K11672 - gmx:100813421 1387.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02221 11 37491407 37497128 Gma11g02221 11 37491407 37497128 ECH
Gma18g00354 18 3043079 3048534 Gma11g02221 11 37491407 37497128 GST
Gma11g02221 11 37491407 37497128 Gma14g00582 14 5668484 5672665 PCT
Gma11g02221 11 37491407 37497128 Gma02g02348 02 49539754 49545560 PCT
Gma14g00582 14 5668484 5672665 Gma11g02221 11 37491407 37497128 PCT
Gma02g02348 02 49539754 49545560 Gma11g02221 11 37491407 37497128 PCT