Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02348 ATGCCTTTCATTTCCAAAATTCAGCGTCAATCCGATTACAACCTCTTCGATTCCAACACTCCTCTTGTGATAGACAATGGCGCCTCGTATTTTCGCATAGGGTGGGCGGGAGAGTCTGAACCTCGTGTTGTTTTTCGCAACCTTGTGCAAAGGCCGCGCCATAAAGTAACTGGAGAAACTGTCACTATTGTGGGTGACCATGATCCAGCATTACTGAAATACTTTGACTGCACTCGCTCAGGGCCACGCTCTGCATTTGACAGCAATGTTGTGTACCAGTTTGAAACAATGGAATATATTCTTGATTTTGGATTTGACCGGATGGGTGCAAATGGAACAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTATGCAACCCGGTTCAATCTCGTAGCAAAATGGCAGAACTTCTTTTTGAGACTTATGGAGTTCCATCAATTGCTTTTGGTGTTGATGTGGCATTCAGCTATAAATATAATCAACAGCAAGGAGTTTGTGCTAAAGATTGTCTTGCTTTGTGTCCTGGATTCAACACAACCCATGTGATTCCGTTTGTAGATGGGGAGCCTGTTTACGAAGGATGCTGTCGTACTAATGTTGGTGGATTCCATGTGACTGATCATTTGAAGCAACTCCTTTCACTTAAATACCCTTATCATTTGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACCAGATTATGTTTCCGAAGTTCGGTTGTTTCAGAAAGGAGCCAAGGAAGCTGAAGAAAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCACCCCCAATTGAGGAGCCTCCTTCCGAGGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAAACAAGGTCAAAGGCTTCGAGAAATGGCTGAGGCAAAGAGGTCTTCTAAGATAAATGAACTGGAAAATGAATTGCATGGTTTAGAGTTTCTTTTTCATCAGCTTGAACAAGTGGAAGAGAGCAAGGTTCTATCTTTCCTGGCCGAAACTGGCTATGGCTCTAGGCAGGAGATAGAATCTGCACGTAATAAAGTTATGCAATCTTTACGGAAAGCAAAAGGTGAACCAAAGAATGAACAAGATGAAACTGAAAAGGTTGATCCTGCCGCTAATGAGAAGTATTCTCTTATTAACATTCCTGATGACATGCTGACCCAAGAACAGCTCAATGAAAAGAAGAAACAGTTGTCACTCAAATCTATGGCTGAAGGGAGGCAGCGATTAAAACAGAAGCGCCATGAAGAGGAATTGGAACGAGAGAGAAAACAACAGCTAGAGGAGGAGAAACGCCTGGAGAACCCAGAGCTTTACTTGGAACAACTGCATGCTAGATACAAAGACCTTTCAGAGAGACTTGACCAACAAAAGCGACTTAAGACAAACGGAGGCCATTCTAATGGAAATAATCTGTCCGGTGGTGTTGGCCGTGGTGAAAGACTAAATGCTGCTCAGAGAGAACGAATGCGTCTCCTGACAACTGCAGCTTTTGATCGTGGTAAGGGTGAGGATACATTTGGTGCCAGAGATGAAGATTGGCAACTATACAAATTGATGAGCAAAGATTATAATGATGATGATGAGGGACCTGATGAGGAAGAGGCAGAGCTGGCCTGCATCTCTTCCAGGCTCCAGGACTTGGATCCAACATTTATACCCAAGTTAGAAGCTGGTATCTCCCAACCTGCTGAGTTGCCACATGTTCGACCTCTGACCAAAGAAGATTTTCAGATTTTTCTTGGGGTCGAAAGATTCAGATGTCCTGAACTATTGTTTAATCCAAACTGGATTGCGGTTGATCAGGTAGGATTAGATGAGATGGTTGGGGTTTCAATAAGGAGGTTACCATACAAGGATGAAAGCTTGGAACAGAGACTGACTAGTTCCATACTTGTTACTGGTGGAAGTTCTCTTTTCCCCGGTATAGTTGAACGCCTGGAAGCTGGAATTCGGATGATTAGACCTTGTGGCACACCTATAAAAATAGTTAGAGCACTGGATCCAGTAATGGATGCATGGAGAGGGGCTGCTTCATTTGCCTCGGACCCACAGTTCCATATGCAAACTTTCAGTAGACTGGATTATTATGAAAAAGGTGAAGACTGGCTTCGAAATTATCAACTGCAATATACATTGTAA 2169 0.4325 MPFISKIQRQSDYNLFDSNTPLVIDNGASYFRIGWAGESEPRVVFRNLVQRPRHKVTGETVTIVGDHDPALLKYFDCTRSGPRSAFDSNVVYQFETMEYILDFGFDRMGANGTEIDHPVLITECVCNPVQSRSKMAELLFETYGVPSIAFGVDVAFSYKYNQQQGVCAKDCLALCPGFNTTHVIPFVDGEPVYEGCCRTNVGGFHVTDHLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIAPDYVSEVRLFQKGAKEAEEKTRCWQLPWVPPPIEEPPSEEEIARKAAIKEKQGQRLREMAEAKRSSKINELENELHGLEFLFHQLEQVEESKVLSFLAETGYGSRQEIESARNKVMQSLRKAKGEPKNEQDETEKVDPAANEKYSLINIPDDMLTQEQLNEKKKQLSLKSMAEGRQRLKQKRHEEELERERKQQLEEEKRLENPELYLEQLHARYKDLSERLDQQKRLKTNGGHSNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWQLYKLMSKDYNDDDEGPDEEEAELACISSRLQDLDPTFIPKLEAGISQPAELPHVRPLTKEDFQIFLGVERFRCPELLFNPNWIAVDQVGLDEMVGVSIRRLPYKDESLEQRLTSSILVTGGSSLFPGIVERLEAGIRMIRPCGTPIKIVRALDPVMDAWRGAASFASDPQFHMQTFSRLDYYEKGEDWLRNYQLQYTL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02348 722 Coils Coil 409 445 - -
Gma02g02348 722 Gene3D - 612 681 - -
Gma02g02348 722 Gene3D - 177 202 - -
Gma02g02348 722 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Gma02g02348 722 SUPERFAMILY Actin-like ATPase domain 170 715 IPR043129 -
Gma02g02348 722 SUPERFAMILY Actin-like ATPase domain 17 158 IPR043129 -
Gma02g02348 722 MobiDBLite consensus disorder prediction 404 439 - -
Gma02g02348 722 Pfam Actin 17 268 IPR004000 -
Gma02g02348 722 Pfam Actin 587 714 IPR004000 -
Gma02g02348 722 PANTHER ACTIN 15 714 IPR004000 -
Gma02g02348 722 Gene3D Actin; Chain A, domain 4 584 611 - -
Gma02g02348 722 SMART actin_3 19 719 IPR004000 -
Gma02g02348 722 Coils Coil 449 469 - -
Gma02g02348 722 MobiDBLite consensus disorder prediction 358 383 - -
Gma02g02348 722 Coils Coil 309 329 - -
Gma02g02348 722 PANTHER ACTIN-RELATED PROTEIN 5 15 714 IPR027664 -
Gma02g02348 722 MobiDBLite consensus disorder prediction 358 380 - -
Gma02g02348 722 Gene3D - 682 710 - -
Gma02g02348 722 Gene3D - 16 170 - -
Gma02g02348 722 Gene3D Actin; Chain A, domain 4 203 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02348 Gma-Chr2 49539754 49545560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02348 490 709 Miscellaneous Gene Families AT2G42100 27.354 1.97e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02348 K11672 - gmx:100804305 1368.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02348 02 49539754 49545560 Gma02g02348 02 49539754 49545560 ECH
Gma14g00582 14 5668484 5672665 Gma02g02348 02 49539754 49545560 GST
Gma18g00354 18 3043079 3048534 Gma02g02348 02 49539754 49545560 PCT
Gma11g02221 11 37491407 37497128 Gma02g02348 02 49539754 49545560 PCT
Gma02g02348 02 49539754 49545560 Gma18g00354 18 3043079 3048534 PCT
Gma02g02348 02 49539754 49545560 Gma11g02221 11 37491407 37497128 PCT