Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00089 ATGCCTCCATACTTGCCTCTTCGCTGGGAGAGTACGGGAGAACAATGGTGGTATGCATCTCCCATCGATTGCGCCGCTGCCAACGGCCACTATGATCTGGTGGTGGAGCTTCTCCACCTGGATACCAACCTCCTCATCAAGCTCACTTCCCTCCGCAGAATCCGCCGCCTCGAAACCGTGTGGGACGACGAGAAACACTTGGAGAACGTCGCGAAATGTCGCTCGCAGGTTGCCAGGAATCTCATGCTGCAATGCGAGACAGGAAGAGGACACAATTCTCTCATTCGCGCCGGCTACGGCGGGTGGCTTCTCTACACTGCTGCCTCAGCTGGTGACGTGGATTTTGTTCGTGAATTGTTGGGGAAGTACCCTGCGCTCGTGTTTGGTGAAGGAGAGTATGGAGTCACTGAGATACTGTATGCTGCGGCGAGGAGCAATAGTTGTGAGGTGTTTGAGCTTCTGCTTCGTTCTGCTCTCTCGCCGCCGCAAATGGAGGATGTTTACGAGAGGGACATGATGAATAGGGCAGTTCATGCTGCTGCCAGAGGAGGGAACTGGGAGACGCTGAAACGGCTTGTGGGGAACGGTTCTGGCGTTTTGGGCTTTAGAGATGCTCAAGGATGCACTGCTCTGCATACTGCAGCTGGTAGAGGACAGGTTGAGGTGGTGAGAAATCTACTTGCATCATTTGATGTTGTAAACTTAACAGATGATCAAGGGAACACAGCATTACATATAGCTTCTTACAGGGGTCACTTAGCAGTGGTTGAGATTCTGATTCTTGCATCCCGCTCACTAGCATTGTTAACCAATCACTACGGAGATACTTTTCTTCATATGGCGGTGGCTGGTTTCAGAAGTCCTGGTTTCCGTAGACTGGACAAGCATACTGAGCTCATGAGGCAATTGGTAAGTGGAAAGACTGTGAACTTACAGGACATTATCAATGTTAAGAACAACGATGGAAGAACGGCGCTTCATGTATCCGTGATGGATAATATTCAATGTGAGCTAGTGGAATTGTTGATGTCTGTGCCATCAATTGATTTGAACATTTGTGATGCTGATGGGATGACCCCTTTGGATCTTTTAAAACAAAGGGCGCGATCAGCATCATCTGATATATTGATCAAGCAAATGATTTCTGCTGGAGGGGTCTCTAAATGTCAGGATGCTGTGGCAGGAAATGCCCTTTGCACTCATGACAAAGCCCATGTCATTGGAGGCAGTCCTGGGACTTCATTTAGAATACCAGATGCAGAGATATTCTTGTACACTGGCATTGAGAATTCATCAGATACCACCAATTATGATCAAGCAAGTGTGGAATCATATTCCTGCTCAAACGAACTAAGCAATTCTGACTCAGCCAATTCCCCACATAACAAGAAGTCTAGTTCTGTCAATGTAAGGCGCTCAAAGTTTCGTCTCCACTGGCCTAGGAGAAGAGAGACAAAAGCAGCTGCCTCAGAATTGGAAGATGATGATTCTCTTGACCCTTTCAGTTCAAGTAGAAACTTGGAAGAGTTTCCAATCCCGTTGCGGCAAAGATACTCACAACCATGCTCCCATCCAAACAACAAAAGAACACAATCTATGAGGACTTCTCTTCCAAGTCCATCCTCCAATGTGAAATTCAGTGCAGGTCTAATGCAAGGTGTAATTCAGCTAAAGCCACATTCTGCTCATTCAACTCCTAGTCCTTTCCAAGAATTATCTGTGGCTTCTCTCTTTTACATCAAGGAACAAAAGGGTGTTGATATAATTGGACCCTCTTGCTCTAATGGATCAATAGATGACGGCACTCTTCTATTGAACTACAAACACTGTTCCTTCAATAAGAAATTAATGGATGGGTATTTTTCTTTTGGAGCACAGGGCCTGGCTGTTGAAGATTCCAATAGCTGCGCAAAGTCAAACAGCGGTTACAAACGTTTAAGTTCCATAGTTGCCTAA 1956 0.4637 MPPYLPLRWESTGEQWWYASPIDCAAANGHYDLVVELLHLDTNLLIKLTSLRRIRRLETVWDDEKHLENVAKCRSQVARNLMLQCETGRGHNSLIRAGYGGWLLYTAASAGDVDFVRELLGKYPALVFGEGEYGVTEILYAAARSNSCEVFELLLRSALSPPQMEDVYERDMMNRAVHAAARGGNWETLKRLVGNGSGVLGFRDAQGCTALHTAAGRGQVEVVRNLLASFDVVNLTDDQGNTALHIASYRGHLAVVEILILASRSLALLTNHYGDTFLHMAVAGFRSPGFRRLDKHTELMRQLVSGKTVNLQDIINVKNNDGRTALHVSVMDNIQCELVELLMSVPSIDLNICDADGMTPLDLLKQRARSASSDILIKQMISAGGVSKCQDAVAGNALCTHDKAHVIGGSPGTSFRIPDAEIFLYTGIENSSDTTNYDQASVESYSCSNELSNSDSANSPHNKKSSSVNVRRSKFRLHWPRRRETKAAASELEDDDSLDPFSSSRNLEEFPIPLRQRYSQPCSHPNNKRTQSMRTSLPSPSSNVKFSAGLMQGVIQLKPHSAHSTPSPFQELSVASLFYIKEQKGVDIIGPSCSNGSIDDGTLLLNYKHCSFNKKLMDGYFSFGAQGLAVEDSNSCAKSNSGYKRLSSIVA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00089 651 ProSiteProfiles Ankyrin repeat profile. 206 238 IPR002110 GO:0005515
Gma18g00089 651 MobiDBLite consensus disorder prediction 467 481 - -
Gma18g00089 651 SUPERFAMILY Ankyrin repeat 104 377 IPR036770 -
Gma18g00089 651 MobiDBLite consensus disorder prediction 451 466 - -
Gma18g00089 651 Gene3D - 57 262 IPR036770 -
Gma18g00089 651 SMART ANK_2a 321 352 IPR002110 GO:0005515
Gma18g00089 651 SMART ANK_2a 273 311 IPR002110 GO:0005515
Gma18g00089 651 SMART ANK_2a 99 128 IPR002110 GO:0005515
Gma18g00089 651 SMART ANK_2a 17 46 IPR002110 GO:0005515
Gma18g00089 651 SMART ANK_2a 239 268 IPR002110 GO:0005515
Gma18g00089 651 SMART ANK_2a 133 163 IPR002110 GO:0005515
Gma18g00089 651 SMART ANK_2a 172 202 IPR002110 GO:0005515
Gma18g00089 651 SMART ANK_2a 206 235 IPR002110 GO:0005515
Gma18g00089 651 ProSiteProfiles Ankyrin repeat region circular profile. 239 260 - -
Gma18g00089 651 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 646 - -
Gma18g00089 651 MobiDBLite consensus disorder prediction 451 542 - -
Gma18g00089 651 ProSiteProfiles Ankyrin repeat region circular profile. 206 227 - -
Gma18g00089 651 Gene3D - 263 381 IPR036770 -
Gma18g00089 651 ProSiteProfiles Ankyrin repeat profile. 239 271 IPR002110 GO:0005515
Gma18g00089 651 MobiDBLite consensus disorder prediction 519 542 - -
Gma18g00089 651 MobiDBLite consensus disorder prediction 482 502 - -
Gma18g00089 651 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 646 - -
Gma18g00089 651 Pfam Ankyrin repeats (3 copies) 178 260 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00089 Gma-Chr18 701138 703906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00089 104 363 Miscellaneous Gene Families AT2G31820 31.579 5.27e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00089 - - gmx:100782564 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00089 18 701138 703906 Gma18g00089 18 701138 703906 ECH
Gma18g00089 18 701138 703906 Gma11g02491 11 40134300 40137623 GST
Gma18g00089 18 701138 703906 Gma05g01463 05 36455107 36458473 PCT
Gma18g00089 18 701138 703906 Gma08g00945 08 7969141 7972034 PCT
Gma05g01463 05 36455107 36458473 Gma18g00089 18 701138 703906 PCT
Gma08g00945 08 7969141 7972034 Gma18g00089 18 701138 703906 PCT