Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01463 ATGCCTCCTTCAAACTTCCCTCTTCGTTGGGAGAGCACAGGAGACCGATGGTGGTATGCATCTCCAATTGATTATGCTGCTGCAAATGGCCTCTATGATCTGGTCACTGAGCTTCTCCACCTTGACACCAACCTCCTCATTAAGCTCACTTCCCTTCGCCGAATTCGCCGCCTTGAAGCCGTGTGGGACGATGAGTCCAAGTTTGAGGATGTTGCCAAGTGCCGGTCCAAGGTTGCAAGGAATCTTATGATTGAGTGTGAGACAGGAAGAGGGCACAACTCTCTTATCCTTGCAGGCTATGGTGGATGGCTTCTCTACACTGCTGCTTCGGCTGGGGATGTAGACTTTGTTCTTGAGTTGTTGGGGAGAGACCCTCTTTTGGTGTTTGGTGAGGGAGAGTATGGTGTCACTGACATGTTTTATGCTGCAGCCAGGGGCAAGAACTGTGAGGTCTTTAAGCTCCTGCTTCATTCTGCTCTTTCAAGAAAGGAGTGCCTTGGTGGCAGTGAAGCAGAATTGGAAGAGAAGTTGGATGAAGGTTCTAAGGTTTTCAAGAGGGATGTGATGAATAGGGCCATTCATGCTGCTGCCAGAGGAGGGAATTGGGAAATACTGAAGCAGATTCTAGGAAGTGTTTCTGTTTCTCAGGTTTTGTCTTATAGAGATGCCCTAGGATGTACTGTCTTGCATGCAGCAGCTGCAAGAGGCCAGGTTGAGGTGGTGAGAAATCTAATTGAATCCTATGATATCATCAACTCAGCTAATGCTCAAGGCAATACAGCATTACATGTGGCCTCTTACAAAGGTTACTTACCCGTGGTAGAGATTCTGGTTGGAGCATCTCCCTTGTTAGCAACGTTAACCAATCACTATGGAGATACTTTTCTTCACATGGTAGTGGCTGGTTTCAGAAGCCCTGGTTTCTGTAGACTGGACAAGCACACTGAGCTCATGAAGCAACTGACAAGTGAAAAGATTGTGAACATGAAGGACATCATCAATGTCAGGAACAATGATGGAAGAACAGCTCTTCATGTTGCTGTGATTCATAATATCCAATGTGATGTAGTGGAATTACTGATGTCTTTTCCATCAATTGATTTGAATATTCGCGATGCTGATGGGATGACCCCCTTGGATCATCTTAGACTAAAATCACGATCAGCATCTTCTGAAATCTTAATCAAGCAGTTAATTTCAGCTGGAGGGATCTCTAATTATCAGGACTATGTGACGAGAAATGCCCTTGTGAAGCATCTTAGGACTCATGGTATTGGAGGCAGTCCCGGAACATCATTTAGAATACCAGATTCTGAGATATTGTTATACACAGGCATTGAGAATTCATGTGATTCCAATTATGATCAGGCAAGTGTAGAATCAAATTCATGGTCAAGTGAAATAAACAACTATGACACAGCCAATTCCCCATGTAACAGCAAGTCTAGTTCTGTCAATTATGGTGCAAGGCACTTAAAGTTTCTGCTCCAAAGTTCTAGAAGAAGAGACACAAAAGAAGCAGCCTCAGATTTAGAAGATGATGTTTCTGTGAATTCCTTCGGTTCAAGGAACAACTTGGAAGACTTTCCAATCCCATTGAGGCAAAGATACTCAAAAATGTGTTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTATCTTCCTAGTCCTTCAGCCAAAAAACATTTTCATGCAGGTCTAGTACAAGGTGTGATTAAGGTAAAGCCACAAATGCCTCTACCTGTTCATTCAACATCTAATCTTTTTCAAGAACTATCTATCTCTTCTCATTCTTCGAATAATAAGCAAAAACGTGTTGATATAATGGGACCCTCTTGCTCCAATCGACCAATGGATGGTGATGGCACACTACAATTGAGCTATAAGCAGGGCTCTTTCAATAAGAAACTGATGAATCGATATTTTTCTTTTGGAGCACATGGCCAGGCTTTGGAGGATGCAAATAGCTGCACGATGTCAAATGGCAGTTCCAAGCATTTTAGTTCTTTAGTTGCATAA 2025 0.4286 MPPSNFPLRWESTGDRWWYASPIDYAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLEAVWDDESKFEDVAKCRSKVARNLMIECETGRGHNSLILAGYGGWLLYTAASAGDVDFVLELLGRDPLLVFGEGEYGVTDMFYAAARGKNCEVFKLLLHSALSRKECLGGSEAELEEKLDEGSKVFKRDVMNRAIHAAARGGNWEILKQILGSVSVSQVLSYRDALGCTVLHAAAARGQVEVVRNLIESYDIINSANAQGNTALHVASYKGYLPVVEILVGASPLLATLTNHYGDTFLHMVVAGFRSPGFCRLDKHTELMKQLTSEKIVNMKDIINVRNNDGRTALHVAVIHNIQCDVVELLMSFPSIDLNIRDADGMTPLDHLRLKSRSASSEILIKQLISAGGISNYQDYVTRNALVKHLRTHGIGGSPGTSFRIPDSEILLYTGIENSCDSNYDQASVESNSWSSEINNYDTANSPCNSKSSSVNYGARHLKFLLQSSRRRDTKEAASDLEDDVSVNSFGSRNNLEDFPIPLRQRYSKMCSLPNNKRTLSIRTYLPSPSAKKHFHAGLVQGVIKVKPQMPLPVHSTSNLFQELSISSHSSNNKQKRVDIMGPSCSNRPMDGDGTLQLSYKQGSFNKKLMNRYFSFGAHGQALEDANSCTMSNGSSKHFSSLVA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01463 674 Pfam Ankyrin repeats (3 copies) 193 281 IPR002110 GO:0005515
Gma05g01463 674 ProSiteProfiles Ankyrin repeat profile. 257 278 IPR002110 GO:0005515
Gma05g01463 674 ProSiteProfiles Ankyrin repeat region circular profile. 224 246 - -
Gma05g01463 674 Gene3D - 12 420 IPR036770 -
Gma05g01463 674 ProSiteProfiles Ankyrin repeat profile. 224 256 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 257 286 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 18 47 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 339 370 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 134 164 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 100 129 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 224 253 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 188 218 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 291 331 IPR002110 GO:0005515
Gma05g01463 674 SMART ANK_2a 374 407 IPR002110 GO:0005515
Gma05g01463 674 ProSiteProfiles Ankyrin repeat region circular profile. 257 278 - -
Gma05g01463 674 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 668 - -
Gma05g01463 674 SUPERFAMILY Ankyrin repeat 105 395 IPR036770 -
Gma05g01463 674 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 668 - -
Gma05g01463 674 Pfam Ankyrin repeat 339 372 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01463 Gma-Chr5 36455107 36458473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01463 105 380 Miscellaneous Gene Families AT2G31820 30.496 7.74e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01463 - - gmx:100791999 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01463 05 36455107 36458473 Gma08g00945 08 7969141 7972034 GST
Gma18g00089 18 701138 703906 Gma05g01463 05 36455107 36458473 PCT
Gma11g02491 11 40134300 40137623 Gma05g01463 05 36455107 36458473 PCT
Gma05g01463 05 36455107 36458473 Gma18g00089 18 701138 703906 PCT
Gma05g01463 05 36455107 36458473 Gma11g02491 11 40134300 40137623 PCT