Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00945 ATGCCTCCTTCACAATTCCCTCTTCGTTGGGAGAGCACAGGAGACCGATGGTGGTATGCATCTCCAATTGATTATGCTGCTGCAAATGGCCTCTATGATCTGGTCACTGAGCTTCTCCACCTTGACACCAACCTCCTCATTAAGCTCACTTCCCTTCGTCGAATTCGCCGCCTAGAAGCCGTGTGGGACAACGAGTCCAAGTTTGAGGATGTTGCCAGGTGCCGGTCCAAGGTTGCAAGGAATCTTATGATTGAGTGTGAGACAGGAAGAGGGCATAAGCATAACTCTCTCATCCTTGCAGGCTATGGTGGATGGCTTCTCTACACTGCTGCTTCGGCCGGGGATGTGGACTTTGTTCTTGAGTTGTTGGGGAGAGACCCTCTTTTGGTGTTTGGTGAGGGAGAGTATGGTGTCACTGATATGTTTTATGCTGCAGCCAGGGGAAAGAACTGTGAGGTCTTTAAGCTGCTGCTTCGTTCTGCTCTTTCAAGAAAGGAGTGCCTTGGTGGAAGTGAAGCAGAATTGGAAGAGAAGTTGGATGAGGGTTCTAAGGTTTTCAAGAGGGATGTGATGAATAGGGCCATCCATGCTGCTGCCAGGGGAGGGAATTGGGAAATACTGAAGCAGATTCTAGCAAGTGTTTCTGTTTCTCAGGTTTTGTCTTATAGAGATTCACAAGGATGTACTGTCTTGCATGCAGCAGCTGCAAGAGGCCAAGTTGAGGTGGTGAGAAATCTAATTGAATCCTATGATATCATCAACTCAGCTAATGCTCAAGGCAATACAGCATTACATGTGGCCTCTTACAGAGGTTACTTACCCGTGGTAGAGATTCTGATTGGAGCATCTCACTCGTTAGCAACGTTAACCAATCACTATGGAGATACTTTTCTTCACATGGCAGTGGTTGGTTTCAGAAGCCCTGGTTTCTGTAGACTGGACAAGCACACTGAGCTCATGAAGCAACTGACAAGTGAAAAAATTGTGAAAATGAAGGATATCATCAATGTCAGGAACAATGATGGAAGAACAGCTCTTCATGTTGCTGTGGTTCATAATATCCAATTTGATGTAGTGGAATTACTGATGTCTGTTCCATCAATTGATTTGAACATTTGCGATGCTGATGGGATGACACCTTTGGATCATCTTAGACAAAAATCACGATCAGTGTCTTCTGAAATCTTAATCAAGCAATTAATTTCAGCTGGAGGGATCTCTAATTATCAGGACTATGTGACAAGAAATGCCCTTGTTAAGCATCTTAGGACTCATGGTATTGGAGGCAGTCCTGGAACATCATTTAGAATACCAGATTCTGAGATATTGTTGTACACAGGCATTGAGAATTCATGTGATGACAATTATGATCAGGCAAGTGTAGAATCAAATTCATGGTCAAGTGAAATAAACAATTATGACTCGGCCAATTCGCCATGTAACAGCAAGTCTAGTTCTGTCAATTATGGGGCAAGGCACCTAAAGTTTCTGCTCCAAAGTTCTAGAAGAAGAGACACAAAAGAGGCAGCCTCAGATTTAGAAGATGATGTTTCTGTGAATTCTTTCAGCTCAAGGAACAACTTGGAAGACTTTCCAATTCCATTGAGGCAAAGATACTCAAAAATGTGTTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTATCTTCCAAGTCCTACAGCCAAAAAATATTTTCATGCAGGTCTAACGCAAGGCGTGATTAAGTTGAACTTTAAGCAGGGCACTTTCAATAGGAGATTGATGAACCGGTACTTTTCTTTTGGAGCACATGGCCAGGCTTTGGAAGATGCAAATAGCTGCACAATGTCAAATTGCAGTTCTAAGCATTTTAGTTCTTTAGTTGCATAA 1875 0.4288 MPPSQFPLRWESTGDRWWYASPIDYAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLEAVWDNESKFEDVARCRSKVARNLMIECETGRGHKHNSLILAGYGGWLLYTAASAGDVDFVLELLGRDPLLVFGEGEYGVTDMFYAAARGKNCEVFKLLLRSALSRKECLGGSEAELEEKLDEGSKVFKRDVMNRAIHAAARGGNWEILKQILASVSVSQVLSYRDSQGCTVLHAAAARGQVEVVRNLIESYDIINSANAQGNTALHVASYRGYLPVVEILIGASHSLATLTNHYGDTFLHMAVVGFRSPGFCRLDKHTELMKQLTSEKIVKMKDIINVRNNDGRTALHVAVVHNIQFDVVELLMSVPSIDLNICDADGMTPLDHLRQKSRSVSSEILIKQLISAGGISNYQDYVTRNALVKHLRTHGIGGSPGTSFRIPDSEILLYTGIENSCDDNYDQASVESNSWSSEINNYDSANSPCNSKSSSVNYGARHLKFLLQSSRRRDTKEAASDLEDDVSVNSFSSRNNLEDFPIPLRQRYSKMCSLPNNKRTLSIRTYLPSPTAKKYFHAGLTQGVIKLNFKQGTFNRRLMNRYFSFGAHGQALEDANSCTMSNCSSKHFSSLVA 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00945 624 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 577 - -
Gma08g00945 624 SMART ANK_2a 293 333 IPR002110 GO:0005515
Gma08g00945 624 SMART ANK_2a 341 372 IPR002110 GO:0005515
Gma08g00945 624 SMART ANK_2a 18 47 IPR002110 GO:0005515
Gma08g00945 624 SMART ANK_2a 226 255 IPR002110 GO:0005515
Gma08g00945 624 SMART ANK_2a 102 131 IPR002110 GO:0005515
Gma08g00945 624 SMART ANK_2a 259 288 IPR002110 GO:0005515
Gma08g00945 624 SMART ANK_2a 136 166 IPR002110 GO:0005515
Gma08g00945 624 SMART ANK_2a 376 409 IPR002110 GO:0005515
Gma08g00945 624 SMART ANK_2a 190 220 IPR002110 GO:0005515
Gma08g00945 624 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 577 - -
Gma08g00945 624 ProSiteProfiles Ankyrin repeat region circular profile. 226 248 - -
Gma08g00945 624 ProSiteProfiles Ankyrin repeat profile. 259 291 IPR002110 GO:0005515
Gma08g00945 624 Pfam Ankyrin repeat 341 374 IPR002110 GO:0005515
Gma08g00945 624 SUPERFAMILY Ankyrin repeat 106 390 IPR036770 -
Gma08g00945 624 ProSiteProfiles Ankyrin repeat profile. 226 258 IPR002110 GO:0005515
Gma08g00945 624 Pfam Ankyrin repeats (3 copies) 195 282 IPR002110 GO:0005515
Gma08g00945 624 Gene3D - 77 427 IPR036770 -
Gma08g00945 624 ProSiteProfiles Ankyrin repeat region circular profile. 259 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00945 Gma-Chr8 7969141 7972034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g00945 196 382 Miscellaneous Gene Families AT2G31820 34.043 1.19e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00945 - - gmx:100811195 1216.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00945 08 7969141 7972034 Gma08g00945 08 7969141 7972034 ECH
Gma05g01463 05 36455107 36458473 Gma08g00945 08 7969141 7972034 GST
Gma18g00089 18 701138 703906 Gma08g00945 08 7969141 7972034 PCT
Gma11g02491 11 40134300 40137623 Gma08g00945 08 7969141 7972034 PCT
Gma08g00945 08 7969141 7972034 Gma18g00089 18 701138 703906 PCT
Gma08g00945 08 7969141 7972034 Gma11g02491 11 40134300 40137623 PCT