Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00073 ATGTGTTTCACCAATTTGATCCATCAAGATAAATCAACTCTTTCACAAAGCAATCATTGTTTATTCCCTGAGGCACTGAATAAAGATTATAGCCCCATTCTACCTGGGCTGCCTGATGATGTGGCTGAGTATTGTCTTGCACTTGTGCCTCGTTCCAACTTCCCTGCTATGGGTGTTGTGTGTAAAGGATGGAGGTCGTTTATTCAAAGCAAAGAATTCACTACTGTGCGAAAATTGGCTGGGATGCTAGAGGAATGGCTCTATTTCTTAACAACAGACTGTGAAGGAAAGGAAAGTCATTGGGAGGTTATGGATTGTCTCGGTCATAAATGCCGATCTCTTCCACCAATGCCTGGTCCAGGAAAGGCTGGGTTCCAAGTGGTGGTTCTTAATGGAAAGCTTCTTGTCATGGCTGGTTATTCTGTTATTGAAGGAACTGCCTTTGCCTCAGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGCTGGAGCAGATTGTCAGACATGATTGTGGCTCGTTATGACTTCGCTTGTGCTGAAGTCGATGGCTTGGTTTATGCTGTGGGAGGCTATGGGGTGAATGGTGACAGTCTCTCCAGTGCTGAGGTGTATGATCCAGATACTGACACGTGGACACTGATAGAGAGCCTTCGCCGCCCGAGATGGGGTTGTTTTGCTTGTGGATTTGAGGCTCATGCAGTATTAGGAAAGAAGTTGTTCTGCATAGAGTGGAAGAACCAGCGGAAGCTAGCTATATTCAGTCCAGAGGACAATTCATGGAAAATGGTACCAGTTCCGTTGACAGGAAGCTCAAGCATTGATTTTCGAATTGGGATACTAGATGAAAAGTTGTTGCTATTCCCTCTGGAAGCTGAAACTGCTTTTCAAACATTGTTGTATGATCCAAATGCAACTCTGGGGTCAGAGTGGCAAACTTGTGACATAAGGCCATCTGGTTTGTGCTTGTGTTGTGTAACAATCAAGGCATGA 990 0.4475 MCFTNLIHQDKSTLSQSNHCLFPEALNKDYSPILPGLPDDVAEYCLALVPRSNFPAMGVVCKGWRSFIQSKEFTTVRKLAGMLEEWLYFLTTDCEGKESHWEVMDCLGHKCRSLPPMPGPGKAGFQVVVLNGKLLVMAGYSVIEGTAFASAEVYQYDSCLNSWSRLSDMIVARYDFACAEVDGLVYAVGGYGVNGDSLSSAEVYDPDTDTWTLIESLRRPRWGCFACGFEAHAVLGKKLFCIEWKNQRKLAIFSPEDNSWKMVPVPLTGSSSIDFRIGILDEKLLLFPLEAETAFQTLLYDPNATLGSEWQTCDIRPSGLCLCCVTIKA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00073 329 Pfam Kelch motif 123 169 IPR006652 GO:0005515
Gma18g00073 329 Pfam Kelch motif 172 217 IPR006652 GO:0005515
Gma18g00073 329 PANTHER KELCH REPEAT F-BOX PROTEIN 231 329 - -
Gma18g00073 329 PANTHER KELCH REPEAT F-BOX PROTEIN 1 231 - -
Gma18g00073 329 SUPERFAMILY Kelch motif 84 287 IPR015915 GO:0005515
Gma18g00073 329 SMART fbox_2 37 77 IPR001810 GO:0005515
Gma18g00073 329 PANTHER OS02G0202900 PROTEIN 1 231 IPR045887 -
Gma18g00073 329 Gene3D - 74 316 IPR015915 GO:0005515
Gma18g00073 329 Pfam F-box domain 36 73 IPR001810 GO:0005515
Gma18g00073 329 PANTHER OS02G0202900 PROTEIN 231 329 IPR045887 -
Gma18g00073 329 SUPERFAMILY F-box domain 31 75 IPR036047 GO:0005515
Gma18g00073 329 SMART kelc_smart 184 231 IPR006652 GO:0005515
Gma18g00073 329 SMART kelc_smart 133 183 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00073 Gma-Chr18 593885 595138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00073 37 215 Miscellaneous Gene Families AT4G33900 28.718 1.13e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00073 - - gmx:100500176 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00073 18 593885 595138 Gma18g00073 18 593885 595138 ECH
Gma18g00073 18 593885 595138 Gma11g02507 11 40249807 40251127 GST
Gma18g00073 18 593885 595138 Gma08g00960 08 8102462 8104236 PCT
Gma08g00960 08 8102462 8104236 Gma18g00073 18 593885 595138 PCT