Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02507 ATGCCTGGTTTTACTGTTGGAAAGAAGAGATTTATCCAGCCAAATATGTGTTTCACCAATTTGATCAATCAAGATAAATCAACTCTTTCACAAAACAATCATTGTTTATTCCCTGAGGCACTGAATAAAGATTATAGCCCCATTCTACCTGGGCTGCCTGATGATGTGGCTGAGTATTGTCTTGCACTCGTGCCTCGTTCCAACTTCCCTGCTATGGGTGGTGTTTGTAAGATATGGAGGTCGTTTATTCAAAGCAAAGAATTTGCTACTGTGCGAAAATTGGCTGGGATGCTTGAGGAATGGCTGTATTTCTTAACAACGGACTGTGAAGGAAAGGAAAGTTATTGGGAGGTTATGGATTGTCTTGGTCATAAATGCCGATCGCTTCCACCAATGCCTGGTCCAGGAAAGGCTGGGTTCCAAGTGGTGGTTCTTAATGGAAAGCTTCTTGTCATGGCTGGTTATTCAGTTATTGAAGGAACTGCCTTTGCCTCAGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGCTGGAGCAGATTGTCAGACATGAATGTGTCTCGTTATGACTTCGCTTGTGCTGAAGTCAATGGTTTGGTTTATGCTGTGGGAGGCTATGGGGTGAATGGTGACAGTCTCTCCAGTGCTGAGGTGTATGATCCAGATACCGACAAGTGGGCACTGATAGAGAGCCTTCGCCGCCCAAGATGGGGTTGTTTTGCTTGTGGATTTGAGGGTAAGCTCTATGTGATGGGTGGAAGGTCAAGCTTTACTATTGGAAACTCCAAGTTTGTTGATATATATAACCCCGAGAGACATAGCTGGTGTGAGATTAAGAATGGTTGTGTTATGGTCACTGCTCATGCAGTATTAGGAAAGAAGTTGTTCTGCATAGAGTGGAAGAACCAACGGAAGCTAGCTATATTCAGTCCAGAGGACAATTCATGGAAAATGGTACCAGTTCCATTGACAGGAAGCTCAAGTATTGGTTTTCGATTTGGGATACTAGATGGTAAGTTGTTGCTATTCCCTCTGGAAGCTGAAACTGCTTTTCAGACATTGTTGTATGATCCAAATGCATCTCTGGGGTCAGAGTGGCAGACTTGTGACATAAGGCCATCTGGTTTGTGCTTATGTTGTGTAACAATCAAGGCATGA 1158 0.4361 MPGFTVGKKRFIQPNMCFTNLINQDKSTLSQNNHCLFPEALNKDYSPILPGLPDDVAEYCLALVPRSNFPAMGGVCKIWRSFIQSKEFATVRKLAGMLEEWLYFLTTDCEGKESYWEVMDCLGHKCRSLPPMPGPGKAGFQVVVLNGKLLVMAGYSVIEGTAFASAEVYQYDSCLNSWSRLSDMNVSRYDFACAEVNGLVYAVGGYGVNGDSLSSAEVYDPDTDKWALIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDIYNPERHSWCEIKNGCVMVTAHAVLGKKLFCIEWKNQRKLAIFSPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFPLEAETAFQTLLYDPNASLGSEWQTCDIRPSGLCLCCVTIKA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02507 385 Pfam Kelch motif 236 279 IPR011498 GO:0005515
Gma11g02507 385 Pfam F-box domain 51 88 IPR001810 GO:0005515
Gma11g02507 385 SUPERFAMILY F-box domain 46 89 IPR036047 GO:0005515
Gma11g02507 385 Gene3D - 86 382 IPR015915 GO:0005515
Gma11g02507 385 PANTHER KELCH REPEAT F-BOX PROTEIN 1 385 - -
Gma11g02507 385 Pfam Kelch motif 187 232 IPR006652 GO:0005515
Gma11g02507 385 Pfam Kelch motif 138 185 IPR006652 GO:0005515
Gma11g02507 385 PANTHER OS02G0202900 PROTEIN 1 385 IPR045887 -
Gma11g02507 385 SMART kelc_smart 148 198 IPR006652 GO:0005515
Gma11g02507 385 SMART kelc_smart 199 246 IPR006652 GO:0005515
Gma11g02507 385 SMART kelc_smart 247 293 IPR006652 GO:0005515
Gma11g02507 385 SUPERFAMILY Kelch motif 99 343 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02507 Gma-Chr11 40249807 40251127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02507 52 230 Miscellaneous Gene Families AT4G33900 26.667 7.78e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02507 - - gmx:100802912 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00073 18 593885 595138 Gma11g02507 11 40249807 40251127 GST
Gma11g02507 11 40249807 40251127 Gma08g00960 08 8102462 8104236 PCT
Gma08g00960 08 8102462 8104236 Gma11g02507 11 40249807 40251127 PCT