LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma18g00044	ATGTCTGCTGCTGTGTCCTCCACAACCCCTCATTTAGAGGAAGAGCTCAAAAACAAAGCAACAAACAACAAGAAGAAGAACAACGTTGGTGGGGAATCAGACCAGCCCCCTTACAATGATGGTGCCAACTCTGATGTTGCTGAAGAAACTGAGCCAGAGGAAGATGATGACTCCAAGTTGGAATCTAACAAAGATTTGGATCTTGGCCCTCAATTCACTCTCAAGGAACAGCTTGAGAAAGACAAAGATGATGAAAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAAGTGTTGACATGTCTGTCGTTGGAAGTGAATGCAAAGACCCTGAAGTGAAGATATTGAGCCTCATTATTACAAGCCCAGATAAGCCTGACCTCACCCTGCCAATTCCATTTACTACTGATCCTAAGAAGAGTCTTTTCATCCTTAAGGAAGGAAGCAAATGCCAAATGAAATTCACCTTCACTGTCTCCAACAACATCGTTTCTGGTCTCAAATACACAAACGTTGTTTGGAAAACTGGCGTTAGAGTGGACAGCAGAAAAAAGATGTTGGGAACTTTTAGTCCTCAGCAGGAACCATATACATTTGAATTGGAAGAAGAAACTATCCCTTCTGGCATGTTCGTCAGGGGAACCTATGCAGCAAGAACCAAGTTTGTAGACGACGATCGAAAATGCTACTTGGATGTCAATTACTACTTTGAAATTCAGAAGAACAGACCAACACCTCAATGA	741	0.4238	MSAAVSSTTPHLEEELKNKATNNKKKNNVGGESDQPPYNDGANSDVAEETEPEEDDDSKLESNKDLDLGPQFTLKEQLEKDKDDESLRKWKEQLLGSVDMSVVGSECKDPEVKILSLIITSPDKPDLTLPIPFTTDPKKSLFILKEGSKCQMKFTFTVSNNIVSGLKYTNVVWKTGVRVDSRKKMLGTFSPQQEPYTFELEEETIPSGMFVRGTYAARTKFVDDDRKCYLDVNYYFEIQKNRPTPQ	246

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma18g00044	246	MobiDBLite	consensus disorder prediction	1	72	-	-
	Gma18g00044	246	SUPERFAMILY	E set domains	47	241	IPR014756	-
	Gma18g00044	246	Pfam	RHO protein GDP dissociation inhibitor	53	241	IPR000406	GO:0005094\|GO:0005737
	Gma18g00044	246	PANTHER	RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED	7	244	-	-
	Gma18g00044	246	Gene3D	Coagulation Factor XIII, subunit A, domain 1	62	243	IPR024792	-
	Gma18g00044	246	PANTHER	RHO GDP-DISSOCIATION INHIBITOR	7	244	IPR000406	GO:0005094\|GO:0005737
	Gma18g00044	246	MobiDBLite	consensus disorder prediction	23	40	-	-
	Gma18g00044	246	PRINTS	RHO protein GDP dissociation inhibitor signature	162	178	IPR000406	GO:0005094\|GO:0005737
	Gma18g00044	246	PRINTS	RHO protein GDP dissociation inhibitor signature	179	194	IPR000406	GO:0005094\|GO:0005737
	Gma18g00044	246	PRINTS	RHO protein GDP dissociation inhibitor signature	221	238	IPR000406	GO:0005094\|GO:0005737

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma18g00044	Gma-Chr18	365865	367759	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma18g00044	K12462		-	gmx:100797593	474.552

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma18g00044	18	365865	367759	Gma11g02537	11	40470889	40473053	GST
	Gma18g00044	18	365865	367759	Gma05g01501	05	36902956	36904842	PCT
	Gma18g00044	18	365865	367759	Gma08g00982	08	8326126	8327569	PCT
	Gma05g01501	05	36902956	36904842	Gma18g00044	18	365865	367759	PCT
	Gma08g00982	08	8326126	8327569	Gma18g00044	18	365865	367759	PCT