Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01501 ATGTCTGCTGCTGTGTCTGCAACCAAGGATGTTCCCTTCAATGCTCATCTGGAGGAAGATATCAAAAACAAAGGAAGCAACAAGGTTGTTGGGGAAGCAGACCGGCTTCCTTACAATGATGATGCCGAAGGAACTGATTCAGAGACAGAGGAAGACCCCAAGTTGGAATTGGATCTTGGTCCTCAGTTTTCCCTCAGGGAACAGCTTGAGAAAGATAAAGATGATGAGAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAGGTATTGATGTGTCTGCTGTTGGAGAAAACAAAGAGCCAGAAGTGAAGATAGTGAGCCTCACCATAATATGTCCAGGGAGGCCTGACCTCATTCTGCCAATTCCATTTACTTCTGAATCTAAGAATAGTATCTTCACCCTTAAGGAAGGAAGTCAATATCGCTTGAAATTCTCCTTCACTGTCTCCAACAACATTGTTTCTGGCCTCAAATACACCAATGTTGTTTGGAAAACTGGGCTTAGAGTGGACAACACAAAAAAGATGTTGGGAACTTATAGCCCAAGCCAGGAACCATATACATATGAATTGGAAGAAGAAACTACCCCTTCGGGGTTGTTTGCTAGGGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCACAAATGCTACTTGGATACTAGTTACCACTTTGAAATTCAGAAGAATTGGTCTACACCCATCTAA 711 0.4262 MSAAVSATKDVPFNAHLEEDIKNKGSNKVVGEADRLPYNDDAEGTDSETEEDPKLELDLGPQFSLREQLEKDKDDESLRKWKEQLLGGIDVSAVGENKEPEVKIVSLTIICPGRPDLILPIPFTSESKNSIFTLKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGLRVDNTKKMLGTYSPSQEPYTYELEEETTPSGLFARGTYSARTKFVDDDHKCYLDTSYHFEIQKNWSTPI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01501 236 MobiDBLite consensus disorder prediction 13 42 - -
Gma05g01501 236 Pfam RHO protein GDP dissociation inhibitor 45 231 IPR000406 GO:0005094|GO:0005737
Gma05g01501 236 PRINTS RHO protein GDP dissociation inhibitor signature 92 107 IPR000406 GO:0005094|GO:0005737
Gma05g01501 236 PRINTS RHO protein GDP dissociation inhibitor signature 152 168 IPR000406 GO:0005094|GO:0005737
Gma05g01501 236 PRINTS RHO protein GDP dissociation inhibitor signature 169 184 IPR000406 GO:0005094|GO:0005737
Gma05g01501 236 PRINTS RHO protein GDP dissociation inhibitor signature 211 228 IPR000406 GO:0005094|GO:0005737
Gma05g01501 236 SUPERFAMILY E set domains 43 233 IPR014756 -
Gma05g01501 236 MobiDBLite consensus disorder prediction 1 59 - -
Gma05g01501 236 PANTHER RHO GDP-DISSOCIATION INHIBITOR 4 235 IPR000406 GO:0005094|GO:0005737
Gma05g01501 236 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 4 235 - -
Gma05g01501 236 Gene3D Coagulation Factor XIII, subunit A, domain 1 56 234 IPR024792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01501 Gma-Chr5 36902956 36904842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01501 K12462 - gmx:100806852 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01501 05 36902956 36904842 Gma05g01501 05 36902956 36904842 ECH
Gma05g01501 05 36902956 36904842 Gma08g00982 08 8326126 8327569 GST
Gma18g00044 18 365865 367759 Gma05g01501 05 36902956 36904842 PCT
Gma11g02537 11 40470889 40473053 Gma05g01501 05 36902956 36904842 PCT
Gma05g01501 05 36902956 36904842 Gma18g00044 18 365865 367759 PCT
Gma05g01501 05 36902956 36904842 Gma11g02537 11 40470889 40473053 PCT