LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g02537	ATGTCTGCTGCTGTGTCCTCCACAACCTCTCATTTAGAGGAAGAGCTTAAAAACAACAACAACAACAACAACGTTGGTGGAGAGTCAGACCAGCCCCCTTACAATGAGGGTGCCAACTCTGATGTAGCTGAAGAAACTGAGCCAGAGGAAGATGATGACTCCAAGTTGGAATCTAACAAAGAACTGGATCTTGGCCCTCAATTCACCCTCAAGGAACAGCTTGAGAAAGATAAAGATGATGTAAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAAGTGTTGACATGTCTGTCGTTGGAAGTGAAAGCAAAGACCCTGAAGTAAAGATATTGAGCCTCATTATTACAAGCCCAGACAAGCCTGACCTCACCCTTCCAATTCCATTTACTACTGATGCTAAGAAGAGTCTTTTCATCCTTAAGGAAGGAAGCAAATGCCAAATGAAATTCACCTTCACTGTCTCCAACAACATCGTTTCTGGTCTCAAATACACAAATGTTGTTTGGAAAACTGGCGTTAGAGTGGACAGCAGAAAAAAGATGTTGGGAACTTTTAGTCCCAAGCAGGAACCATATACATTTGAATTGGAAGAAGAAACTATCCCTTCTGGCATGTTCGTCAGGGGAACCTATGCAGCAAGAACCAAGTTTGTAGATGACGATCGAAAATGCTACTTGGATGTCAGTTACTACTTTGAAATTCAGAAGAACAGACCAACACCTCAATGA	729	0.4225	MSAAVSSTTSHLEEELKNNNNNNNVGGESDQPPYNEGANSDVAEETEPEEDDDSKLESNKELDLGPQFTLKEQLEKDKDDVSLRKWKEQLLGSVDMSVVGSESKDPEVKILSLIITSPDKPDLTLPIPFTTDAKKSLFILKEGSKCQMKFTFTVSNNIVSGLKYTNVVWKTGVRVDSRKKMLGTFSPKQEPYTFELEEETIPSGMFVRGTYAARTKFVDDDRKCYLDVSYYFEIQKNRPTPQ	242

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g02537	242	MobiDBLite	consensus disorder prediction	1	36	-	-
	Gma11g02537	242	MobiDBLite	consensus disorder prediction	1	68	-	-
	Gma11g02537	242	Pfam	RHO protein GDP dissociation inhibitor	49	237	IPR000406	GO:0005094\|GO:0005737
	Gma11g02537	242	PANTHER	RHO GDP-DISSOCIATION INHIBITOR	6	240	IPR000406	GO:0005094\|GO:0005737
	Gma11g02537	242	PRINTS	RHO protein GDP dissociation inhibitor signature	158	174	IPR000406	GO:0005094\|GO:0005737
	Gma11g02537	242	PRINTS	RHO protein GDP dissociation inhibitor signature	175	190	IPR000406	GO:0005094\|GO:0005737
	Gma11g02537	242	PRINTS	RHO protein GDP dissociation inhibitor signature	217	234	IPR000406	GO:0005094\|GO:0005737
	Gma11g02537	242	SUPERFAMILY	E set domains	43	237	IPR014756	-
	Gma11g02537	242	PANTHER	RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED	6	240	-	-
	Gma11g02537	242	Gene3D	Coagulation Factor XIII, subunit A, domain 1	58	239	IPR024792	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g02537	Gma-Chr11	40470889	40473053	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g02537	K12462		-	gmx:100793380	462.225

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma18g00044	18	365865	367759	Gma11g02537	11	40470889	40473053	GST
	Gma11g02537	11	40470889	40473053	Gma05g01501	05	36902956	36904842	PCT
	Gma11g02537	11	40470889	40473053	Gma08g00982	08	8326126	8327569	PCT
	Gma05g01501	05	36902956	36904842	Gma11g02537	11	40470889	40473053	PCT
	Gma08g00982	08	8326126	8327569	Gma11g02537	11	40470889	40473053	PCT