Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02174 ATGGAACATGGCTTCCCCAAAGGCAAGTTCAAGAGCCTCTGTGTCTTTTGCGGCAGCAACTCTGGCAACCGTCAAGTTTTCAGTGACGCCACCATTGAATTGGCCAATGAACTGGTTAAGAGGAACATTGACTTGGTGTATGGTGGGGGAAGTGTTGGGCTGATGGGCCTAATATCCCAGAGAATGTATGATGGAGGCTGCCATGTTCTAGGGGTTATTCCAAAAGCTCTCATGCCTCTTGAGATATCTGGTGAACCAGTTGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTATCGCCCTCCCTGGAGGATATGGAACTATGGAAGAGCTGTTGGAGATGATAACTTGGGCTCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTCAATGTTGATGGTTACTATAACTCTTTGCTCGCATTATTTGACAATGGTGTTGAAGAAGGCTTCATTAAGCATGGTGCTCGGAATATACTTGTTGCGGCTTCATCAGCCAAAGAACTTATGATGAAGATGGAGCAATATTCTCCTTCCCATGAACATGTAGCTCCTCATGATAGCTGGCAGACAAGGCAATTGGGTAATTATGCAGAACAGGAAAATGCAGAATGA 651 0.4439 MEHGFPKGKFKSLCVFCGSNSGNRQVFSDATIELANELVKRNIDLVYGGGSVGLMGLISQRMYDGGCHVLGVIPKALMPLEISGEPVGEVRIVSDMHERKAAMAQEADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNSLLALFDNGVEEGFIKHGARNILVAASSAKELMMKMEQYSPSHEHVAPHDSWQTRQLGNYAEQENAE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02174 216 MobiDBLite consensus disorder prediction 201 216 - -
Gma17g02174 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Gma17g02174 216 SUPERFAMILY MCP/YpsA-like 10 188 - -
Gma17g02174 216 MobiDBLite consensus disorder prediction 192 216 - -
Gma17g02174 216 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Gma17g02174 216 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
Gma17g02174 216 Gene3D - 10 204 - -
Gma17g02174 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02174 Gma-Chr17 39375972 39384136 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02174 K22522 - gmx:100819765 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02174 17 39375972 39384136 Gma04g00486 04 4331941 4335025 PCT
Gma17g02174 17 39375972 39384136 Gma06g00477 06 4075190 4077636 PCT
Gma04g00486 04 4331941 4335025 Gma17g02174 17 39375972 39384136 PCT
Gma06g00477 06 4075190 4077636 Gma17g02174 17 39375972 39384136 PCT