Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00486 ATGGAGGAAGGGTACCCCAGAAGCAAGTTCAAGACCGTGTGTGTCTTCTGTGGCAGCAACAGTGGCAACCGACAAGTCTTCGGTGACGCTGCGATTCAATTGGGCAATGAACTGGTTAAGAGGAACATAGACTTGGTGTATGGTGGGGGCAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGATCATTCCAAAAGCTCTCATGCCTCTCGAGATATCTGGTGAAACAGTAGGTGAAGTGAGGATTGTTTCAGATATGCACGAGCGTAAGGCTGCAATGGCACAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATATGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATCCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGTTTCATTAAGCCTTGTGCACGGAATATAGTTGTCTCTGCTACGTCAGCCAAAGAACTTATGATGAAAATGGAGCACTACACTCCTTCGCACGAACATGTTGCCCCTCATCAGAGCTGGCAGATGAAACAATTAGGTAATATCCAGATGCAGAGTGAGACTGTTATTGATGGAAGGTTTTTCTCCGAAAATTGA 678 0.4558 MEEGYPRSKFKTVCVFCGSNSGNRQVFGDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPCARNIVVSATSAKELMMKMEHYTPSHEHVAPHQSWQMKQLGNIQMQSETVIDGRFFSEN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00486 225 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
Gma04g00486 225 SUPERFAMILY MCP/YpsA-like 9 188 - -
Gma04g00486 225 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Gma04g00486 225 Gene3D - 9 204 - -
Gma04g00486 225 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Gma04g00486 225 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00486 Gma-Chr4 4331941 4335025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00486 K22522 - gmx:100306704 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00486 04 4331941 4335025 Gma06g00477 06 4075190 4077636 GST
Gma17g02174 17 39375972 39384136 Gma04g00486 04 4331941 4335025 PCT
Gma04g00486 04 4331941 4335025 Gma17g02174 17 39375972 39384136 PCT