Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00477 ATGGAGGAAGGGTACCCCAGAAGCAAGTTCAAGACCGTGTGTGTCTTCTGTGGCAGCAACAGTGGCAACCGACAAGTCTTCAGTGACGCTGCGATTCAATTGGGCAATGAACTGGTTAAGAGGAACATAGACTTGGTGTATGGTGGGGGCAGTGTTGGGCTAATGGGCTTAATATCTCAGAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGTATGTGCATAAAAAGAAAAAGAAAAAAAACTTTTTAATATCAGGTGAAACAGTAGGTGAAGTGAGAATTGTTTCAGATATGCACGAGCGTAAAGCTGCCATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATATGGAACCATGGAGGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATCCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCCTTGTGCACGGGATATAGTTGTCTCTGCTACGTCAGCCAAAGAACTTATGATGAAGATGGAGCACTACACTCCTTCGCACGAACATGTTGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATCCAGATGCAGAGTGA 648 0.4475 MEEGYPRSKFKTVCVFCGSNSGNRQVFSDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGYVHKKKKKKNFLISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPCARDIVVSATSAKELMMKMEHYTPSHEHVAPHESWQMKQLGNYPDAE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00477 215 Pfam Possible lysine decarboxylase 55 187 IPR031100 -
Gma06g00477 215 SUPERFAMILY MCP/YpsA-like 9 190 - -
Gma06g00477 215 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 208 - -
Gma06g00477 215 TIGRFAM TIGR00730: TIGR00730 family protein 11 190 IPR005269 GO:0009691|GO:0016787
Gma06g00477 215 PANTHER LOG FAMILY PROTEIN YJL055W 8 208 - -
Gma06g00477 215 Gene3D - 9 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00477 Gma-Chr6 4075190 4077636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00477 K22522 - gmx:100785484 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00486 04 4331941 4335025 Gma06g00477 06 4075190 4077636 GST
Gma17g02174 17 39375972 39384136 Gma06g00477 06 4075190 4077636 PCT
Gma06g00477 06 4075190 4077636 Gma17g02174 17 39375972 39384136 PCT