Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02123 ATGATGATGATTCGATTTCCATTGGTGGTGGGTCTTGTGTTGATGATTTGTGCCATGAGATGCAGAATGGCCAAAGCAGCAGAACAAAGTCCTGATTCTGGGAATGTGTACACGCTAGCTTCAGTGAGGGAGGATTTGGTTAGGCAAGAGGATACCATCATTTATGGTCTCATTGAGAGAGCCAAGTTCCCTAGCAATCCTCACACCTATGATGAAGAGTATGCTCAAATCCAGGGTTTTTGTGGCTCATTGGTAGAATTTGTTGTTAAGAATACAGAGGCCATTCAAGCTAAGGCTGGAAGATACAAAAACCCTGAAGAAAACGCCTTCTTCCCAGAAAATTTACCACCATCAATTGTGCCATCTTACTCCTTCAAACAGTTTTTGCATCCTGGAGCTGCTTCAATTAACATTAACAAGTCCATCTGGAAAATGTATTTCCAAGAGTTACTTCCATTGGTTGCTACTTCGGGGGATGATGGAAACTATGCACAAACTGCAGCTAATGATCTTTCATTATTGCAGGCCATCTCTAGAAGGATTCACTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATGCTCCTCAAGACTACGAGCCTTTAATTCGAGCTAAGGATAAAGAAGGATTGATGAAATTGTTGACATTTACAAGCGTTGAAGAGACGGTGAGGAAGAGGGTTGAAAAGAAGGCCGCAGTGTTTGGGCAGGAAGTGAGTCTTGACAATGAGGACGATGATGAGGAAAACCATAAGTTTGATCCATCAGTGGCTTCTAGCTTGTACAAAAATTGGGTGATACCCTTTACCAAGGAGGTTCAGGTTGAGTACCTATTGCGGCGTCTAGACTGA 852 0.4272 MMMIRFPLVVGLVLMICAMRCRMAKAAEQSPDSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNPHTYDEEYAQIQGFCGSLVEFVVKNTEAIQAKAGRYKNPEENAFFPENLPPSIVPSYSFKQFLHPGAASININKSIWKMYFQELLPLVATSGDDGNYAQTAANDLSLLQAISRRIHYGKFVAEVKFRDAPQDYEPLIRAKDKEGLMKLLTFTSVEETVRKRVEKKAAVFGQEVSLDNEDDDEENHKFDPSVASSLYKNWVIPFTKEVQVEYLLRRLD 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02123 283 SUPERFAMILY Chorismate mutase II 33 283 IPR036263 GO:0046417
Gma17g02123 283 TIGRFAM CM_pl-yst: chorismate mutase 38 283 IPR008238 GO:0004106|GO:0009073
Gma17g02123 283 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 31 283 IPR037039 GO:0004106|GO:0009073
Gma17g02123 283 ProSiteProfiles Chorismate mutase domain profile. 30 283 IPR008238 GO:0004106|GO:0009073
Gma17g02123 283 PIRSF Chor_mut_AroQ_eu 25 283 IPR008238 GO:0004106|GO:0009073
Gma17g02123 283 PANTHER CHORISMATE MUTASE 11 283 - -
Gma17g02123 283 PANTHER CHORISMATE MUTASE 11 283 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02123 Gma-Chr17 38752809 38756174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02123 K01850 - gmx:100808361 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02123 17 38752809 38756174 Gma17g02123 17 38752809 38756174 ECH
Gma17g02123 17 38752809 38756174 Gma14g00939 14 10615997 10619100 GST
Gma17g02123 17 38752809 38756174 Gma04g00566 04 5066514 5068625 PCT
Gma17g02123 17 38752809 38756174 Gma06g00553 06 4881818 4884035 PCT
Gma04g00566 04 5066514 5068625 Gma17g02123 17 38752809 38756174 PCT
Gma06g00553 06 4881818 4884035 Gma17g02123 17 38752809 38756174 PCT