Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00553 ATGATGCTTCGATTCCTAGTGCTGCTTCTTACGTTGGCAAGTTGTAGGGAGAGTAACAAAATGGCGAAAGCAGAGTATAACTATACGGTTGATTCGGCGAGAGCGTCTTTGGTTAGACAAGAGGACACCATCATTTTTGGTTTGATTGAGAGAGCCAGGTTCCCCTTAAATTCTCCAACCTACAATCAAAGTTACGCTTCCATTCCTCAATTTCGTGGCACATTGCTCGATTTTCTCGTTCGTGACACGGAGGTCATTCAAGCTAAGGCTGGAAGATACACTAACCTTGAAGAAAATCCTTTCTTCCCAGAAAATTTACCACCTTCGGTTGAGCCACATTACCCCTTCTCACAGTTTTTGCATCCTTCAGCCGCTATGATCAACATAAACAATGTCATTTGGAAACTGTACATTGATGAGCTGCTTCCAATATTTGTTGCTTCTGGTGATGATGGAAACTATGCACAAACTGCTGCTACCGATCTTTCATTGTTGCAGGCAATCTCTAGAAGGATTCATTACGGAAAGTTTATTGCCGAGGCCAAATTCAGAGAATCTCCTAAAGGCTATGAGCCTTTAATTCGTGCTAAGGACAAAGAAGCATTGATGAAATTATTGACAATTGAGAGCGTTGAAGAGATGGTGGTGAAGAGGGTTAAAAAGAAGGCCATGGTGTTAGGGCAGGAAGTGAGCCTTGATCGTAATGTCAAGGGAATAAAATACAAGGTTGATCCATCAGTAGTTTCTTTCTTGTACCAGAAATGGTTAATACCCCTCACAAAAAACGTTGAAGTCGAATACTTATTAAGCCGCTTAGACTGA 822 0.4161 MMLRFLVLLLTLASCRESNKMAKAEYNYTVDSARASLVRQEDTIIFGLIERARFPLNSPTYNQSYASIPQFRGTLLDFLVRDTEVIQAKAGRYTNLEENPFFPENLPPSVEPHYPFSQFLHPSAAMININNVIWKLYIDELLPIFVASGDDGNYAQTAATDLSLLQAISRRIHYGKFIAEAKFRESPKGYEPLIRAKDKEALMKLLTIESVEEMVVKRVKKKAMVLGQEVSLDRNVKGIKYKVDPSVVSFLYQKWLIPLTKNVEVEYLLSRLD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00553 273 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Gma06g00553 273 PIRSF Chor_mut_AroQ_eu 16 273 IPR008238 GO:0004106|GO:0009073
Gma06g00553 273 PANTHER CHORISMATE MUTASE 1 273 - -
Gma06g00553 273 ProSiteProfiles Chorismate mutase domain profile. 21 273 IPR008238 GO:0004106|GO:0009073
Gma06g00553 273 PANTHER CHORISMATE MUTASE 1 273 IPR008238 GO:0004106|GO:0009073
Gma06g00553 273 TIGRFAM CM_pl-yst: chorismate mutase 30 273 IPR008238 GO:0004106|GO:0009073
Gma06g00553 273 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 22 273 IPR037039 GO:0004106|GO:0009073
Gma06g00553 273 SUPERFAMILY Chorismate mutase II 21 273 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00553 Gma-Chr6 4881818 4884035 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00553 K01850 - gmx:100779968 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00553 06 4881818 4884035 Gma06g00553 06 4881818 4884035 ECH
Gma04g00566 04 5066514 5068625 Gma06g00553 06 4881818 4884035 GST
Gma17g02123 17 38752809 38756174 Gma06g00553 06 4881818 4884035 PCT
Gma14g00939 14 10615997 10619100 Gma06g00553 06 4881818 4884035 PCT
Gma06g00553 06 4881818 4884035 Gma17g02123 17 38752809 38756174 PCT
Gma06g00553 06 4881818 4884035 Gma14g00939 14 10615997 10619100 PCT