Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00566 ATGATGCTTCGATTCCTAGTGCTGTTTCTTACGTTGGCAAGTTGTAGGGAGAGTTACAAAATGGCGAAAGCAGAGTATAACTATACGGTAGATTCAGCGAGAGCGTCTTTGGTTAGACAAGAAGACACCATCATATTTGGTTTGATCGAGAGAGCAAGGTTCCCCTTAAATTCTCCAACCTACAATCAAAGTTACACTTCCATTCCCCAATTTCGTGGCACATTGCTCGATTTTCTCGTTCGCCACACCGAGGCCATTCAAGCTAAGGCAGGAAGGTACATTAACCCTGAAGAAAATCCTTTCTTCCCAGAAAATTTACCACCTTCGGTTGTGCCACGTTACCCCTTCTCACAGTTTTTGCATCCTGCAGCCGCTATGATCAACATAAACAATGCCATATGGAAACTGTACTTTGATGAGCTGCTTCCAATGTTTGTTGCTTCTGGTGATGATGGCAACTATGCGCAAACTGCTGCTACCGATCTTTCATTGTTGCAGGCCATCTCTAGAAGGATTCATTACGGAAAGTTTGTTGGTGAGGCCAAATTCAGAGAATCTCCTCAAGGCTATGAGCCTTTAATTCGTGCTAAGGACAAAGGAGCATTGATGAAATTGTTAACATATGAGAGCGTTGAAGAGATGGTGGTGAAGAGGGTTAAAAAGAAGGCCATGGTGTTTGGGCAGGAAGTGAGCCTTGATCGTGATGTCAAGGGAATAACATACAAGGTTGATCCATCAGTAGTTTCTCTCTTGTACCAGAAATGGTTAATACCCCTCACAAAAAATGTTGAAGTCGAGTACTTACTAAACCGCTTAGACTGA 822 0.4307 MMLRFLVLFLTLASCRESYKMAKAEYNYTVDSARASLVRQEDTIIFGLIERARFPLNSPTYNQSYTSIPQFRGTLLDFLVRHTEAIQAKAGRYINPEENPFFPENLPPSVVPRYPFSQFLHPAAAMININNAIWKLYFDELLPMFVASGDDGNYAQTAATDLSLLQAISRRIHYGKFVGEAKFRESPQGYEPLIRAKDKGALMKLLTYESVEEMVVKRVKKKAMVFGQEVSLDRDVKGITYKVDPSVVSLLYQKWLIPLTKNVEVEYLLNRLD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00566 273 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Gma04g00566 273 PIRSF Chor_mut_AroQ_eu 17 273 IPR008238 GO:0004106|GO:0009073
Gma04g00566 273 ProSiteProfiles Chorismate mutase domain profile. 21 273 IPR008238 GO:0004106|GO:0009073
Gma04g00566 273 SUPERFAMILY Chorismate mutase II 21 273 IPR036263 GO:0046417
Gma04g00566 273 TIGRFAM CM_pl-yst: chorismate mutase 30 273 IPR008238 GO:0004106|GO:0009073
Gma04g00566 273 PANTHER CHORISMATE MUTASE 1 273 - -
Gma04g00566 273 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 22 273 IPR037039 GO:0004106|GO:0009073
Gma04g00566 273 PANTHER CHORISMATE MUTASE 1 273 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00566 Gma-Chr4 5066514 5068625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00566 K01850 - gmx:100791095 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00566 04 5066514 5068625 Gma04g00566 04 5066514 5068625 ECH
Gma04g00566 04 5066514 5068625 Gma06g00553 06 4881818 4884035 GST
Gma17g02123 17 38752809 38756174 Gma04g00566 04 5066514 5068625 PCT
Gma14g00939 14 10615997 10619100 Gma04g00566 04 5066514 5068625 PCT
Gma04g00566 04 5066514 5068625 Gma17g02123 17 38752809 38756174 PCT
Gma04g00566 04 5066514 5068625 Gma14g00939 14 10615997 10619100 PCT