Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02065 ATGTTGTGTAAACTGGTTCCGGTGCCGCGCAAGAAAAAACCCGGTTTGAACCCGGTTTACCTTAACGTCTACGACCTAACCCCAATTAACGGTtACGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGTGTTCAAGTTCATGGGGTTGAATATGGATTTGGAGCACACGAACGCGACACGACTGGGATTTTTGAAGTGGAGCCTAGACACTGCCCTGGATTCACCTTCAGGAAATCAATTTTCATTGGATCAACGGATATGGGGCCGAAGGATGTTCGCGCGTTCATGGAGAGGCTGGCTGAAGAGTATTCTGGGAACACCTACCACCTTATCCAGAAAAATTGCAACCACTTCTGCGAAGATGTTTGTGTCAGATTAACGGGAAAGTCTATTCCTCGATGGGTGAATCGGCTTGCTAGACTCGGTTTTCTCTGCAACTGTGTTCTTCCACCTAGCCTAAATGAAACAAAGGTTCGCCAAGTTACAATAGACAGGGTTCAAGAAGGAGGAGAAAAGAAGAAAATGAGAAGCCAGTCGAGCAGGTACGAGGCTTCACCCAATCCTACATTGTCCAGTAGCCAAAGACATTGCCTTCCTCCATCTTCTGTAATTAATGCTTCTCCGTCCTCAACCTTAACCGTAAAGTAA 651 0.4654 MLCKLVPVPRKKKPGLNPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPRHCPGFTFRKSIFIGSTDMGPKDVRAFMERLAEEYSGNTYHLIQKNCNHFCEDVCVRLTGKSIPRWVNRLARLGFLCNCVLPPSLNETKVRQVTIDRVQEGGEKKKMRSQSSRYEASPNPTLSSSQRHCLPPSSVINASPSSTLTVK 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02065 216 PANTHER DESUMOYLATING ISOPEPTIDASE 2 214 IPR008580 GO:0008233
Gma17g02065 216 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Gma17g02065 216 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Gma17g02065 216 Gene3D PPPDE domains 13 170 IPR042266 -
Gma17g02065 216 MobiDBLite consensus disorder prediction 168 216 - -
Gma17g02065 216 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 214 - -
Gma17g02065 216 MobiDBLite consensus disorder prediction 181 216 - -
Gma17g02065 216 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02065 Gma-Chr17 37657788 37660800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02065 K22763 - gmx:100786432 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02065 17 37657788 37660800 Gma14g01047 14 13114006 13117919 GST
Gma17g02065 17 37657788 37660800 Gma04g00582 04 5276696 5278729 PCT
Gma17g02065 17 37657788 37660800 Gma06g00568 06 5083353 5085452 PCT
Gma04g00582 04 5276696 5278729 Gma17g02065 17 37657788 37660800 PCT
Gma06g00568 06 5083353 5085452 Gma17g02065 17 37657788 37660800 PCT