Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00568 ATGCTGCGCAAGCTTGTGTCAGGGCCACGCAAGAACAAGCCTGGCACAGTTCCCGTTCACCTCAACGTCTATGATCTCACCCCAATCAACGGCTATGCCTATTGGCTTGGCCTTGGAGTCTACCATTCTGGGGTTCAAGTTCATGGATTGGAATATGGTTTTGGTGCGCACGAGCACGACACAACGGGGATTTTCGAAGTCCAACCCAAACACTGCCCTGGGTTCACTTTCAGAAAGTCAATTTTCATCGGAACAACAGATCTGGGTCCGAAGGATGTTCGAGCATTCATGGAGAAGCTGGCTCAGGATTACTCCGGCAACACCTATCATCTCATTTCCAAGAATTGCAACCATTTCTGTAACGATGTTTGTCTCAAATTGACCGGAAAGTCAATCCCTCGTTGGGTCAACCGGCTTGCTCGACTTGGTCTTCTGTGCAACTGTGTTCTCCCACCTGGCCTAAATGACACAAAGGTTTCACAAGCTGCATCAGACAGGGTTCAAGAAGGTGAAAAGAGGAAAATAAGAAGCCAGTCCTGCAGGTACGAGGGTTCCTCCAATCCTTCATCGTCGCAACGTTCAGCAATTAAAAGTAGTAGTAGCCAAAGGCATTGCCATCCTCCATCTTCATCTTTGATTAATGCTGCTTCAGCTTCAACCTTAACAGTGAAGTAA 675 0.477 MLRKLVSGPRKNKPGTVPVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGLEYGFGAHEHDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGPKDVRAFMEKLAQDYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVSQAASDRVQEGEKRKIRSQSCRYEGSSNPSSSQRSAIKSSSSQRHCHPPSSSLINAASASTLTVK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00568 224 MobiDBLite consensus disorder prediction 164 224 - -
Gma06g00568 224 MobiDBLite consensus disorder prediction 180 224 - -
Gma06g00568 224 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Gma06g00568 224 MobiDBLite consensus disorder prediction 165 179 - -
Gma06g00568 224 Gene3D PPPDE domains 12 173 IPR042266 -
Gma06g00568 224 PANTHER DESUMOYLATING ISOPEPTIDASE 2 222 IPR008580 GO:0008233
Gma06g00568 224 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 222 - -
Gma06g00568 224 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Gma06g00568 224 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00568 Gma-Chr6 5083353 5085452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00568 K22763 - gmx:100306675 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00582 04 5276696 5278729 Gma06g00568 06 5083353 5085452 GST
Gma17g02065 17 37657788 37660800 Gma06g00568 06 5083353 5085452 PCT
Gma14g01047 14 13114006 13117919 Gma06g00568 06 5083353 5085452 PCT
Gma06g00568 06 5083353 5085452 Gma17g02065 17 37657788 37660800 PCT
Gma06g00568 06 5083353 5085452 Gma14g01047 14 13114006 13117919 PCT