Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00582 ATGCTGCGCAAGAACAAGCTTGGCACCGTTCCCGTTCACCTCAACGTCTATGATCTCACCCCAATTAATGGCTACGCCTATTGGTTTGGCCTTGGACTCTACCATTCTGGGGTTCAAGTTCATGGGCTGGAATATGGATTTGGTGCGAACGAGCACGACACAACGGGGATTTTCCAAGTTCAACCGAAACACTGCCCTGGGTTCACCTTCAGAAAGTCAATTTTCATCGGAACAACAGATCTGGGTGCCAAGGATGTTCGAGCATTCATGGAGAAGCTAGCTCAAGATTATTCTGGCAATACCTACCATCTCATTTCCAAGAATTGCAACCATTTCTGTAACGATGTTTGTCTCAAATTGACCGGAAAGTCAATCCCTCGTTGGGTCAACCGGCTTGCTCGACTTGGTCTTCTGTGCAACTGTGTTCTCCCCCCTGGCCTAAATGACACAAAGGTTTCACAAGTTGCATCAGACAGGGTTCAAGAAGGTGAAAAGAGGAAAATTAGAAGCCATTCCTGTAGGTACGAAGGTTCCTCCAATCCTTCATCGTCTCGACGTTCAACAATTAAGAGTAGTAGTAGCCAAAGACATTGCCTTCCTCCATCTTCTTCTTTGATTAATGCTGCTTCAGCTTCAACCTTAACAGTGAAGTAA 654 0.4587 MLRKNKLGTVPVHLNVYDLTPINGYAYWFGLGLYHSGVQVHGLEYGFGANEHDTTGIFQVQPKHCPGFTFRKSIFIGTTDLGAKDVRAFMEKLAQDYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVSQVASDRVQEGEKRKIRSHSCRYEGSSNPSSSRRSTIKSSSSQRHCLPPSSSLINAASASTLTVK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00582 217 PANTHER DESUMOYLATING ISOPEPTIDASE 3 215 IPR008580 GO:0008233
Gma04g00582 217 MobiDBLite consensus disorder prediction 158 173 - -
Gma04g00582 217 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 3 215 - -
Gma04g00582 217 MobiDBLite consensus disorder prediction 174 204 - -
Gma04g00582 217 ProSiteProfiles PPPDE domain profile. 10 147 IPR008580 GO:0008233
Gma04g00582 217 Gene3D PPPDE domains 7 165 IPR042266 -
Gma04g00582 217 SMART DUF862_2a 10 148 IPR008580 GO:0008233
Gma04g00582 217 Pfam PPPDE putative peptidase domain 11 143 IPR008580 GO:0008233
Gma04g00582 217 MobiDBLite consensus disorder prediction 157 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00582 Gma-Chr4 5276696 5278729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00582 K22763 - gmx:100820198 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00582 04 5276696 5278729 Gma06g00568 06 5083353 5085452 GST
Gma17g02065 17 37657788 37660800 Gma04g00582 04 5276696 5278729 PCT
Gma14g01047 14 13114006 13117919 Gma04g00582 04 5276696 5278729 PCT
Gma04g00582 04 5276696 5278729 Gma17g02065 17 37657788 37660800 PCT
Gma04g00582 04 5276696 5278729 Gma14g01047 14 13114006 13117919 PCT