Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g02015 ATGGCCACCGAGCACGAAAAGCAGTTAATTGTGGCCAAACCGAACCCTAACACCAAAAGCCCTCGCCGATCCTCCACCTCTTCCTCGCTCGCCATCATCGACGGCATTTTCGCGAGAAAAAGCTTCTTCTACGACAGGCTTCCCTCCCAACCACTCAGACTCACCGTTCTCAAACTCGACGGTTCCTGCTTCCATATTCAAGTTTCGAAGACCGCCACCGTTGCGGAACTGAAGGACGCAGTGGAGGCCGTGTTCAGTCACGTGCCTCACAAGGGGCCTGCCAAAATTTCATGGGCACATGTCTGGGGGCAGTTTTGCTTATGCTATGATGGACAGAAGCTAGTTACAGAAAAGGATAATCTTCGAAATTATGGTATCAAGGATGGTGACCAGCTTCGTTTCATCCGCCATGTTACAAACAATTGCTGTGTTCAAAGAAAGCGGTTGAAGAAAAGAGTTGTCTATTTGAAACAACACAGGAGGTGCAGGTCATCGCAAGTGGATGGCTATCAACCCAAAGGAAATTGTGATGATGATGAGATTGGTTCTGATGATGAAGCCACAGATAATGGGAAGATCAAGCACCATATTGAAGAAGAGGAAGAAGAAGAAAGAGAAGAAGAGTGTGTTGGAAAGAACAAATTAGCTGGCTTTTTGGGAGAGCTGTTTTCATACACTCCACTGGCAGTTGTGAGAAGAACTAGAACTAAAAGCAAGATTTGGCCAACAACTATGCCCAAATGTATACTTGGTAGTTTTAGAAAGATTAGAAGTATTGTATGCTTTGGCAGGAAGAGGCACTATTCTCGGAGACTTCCATGGAGACCGCATTAA 834 0.458 MATEHEKQLIVAKPNPNTKSPRRSSTSSSLAIIDGIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKTATVAELKDAVEAVFSHVPHKGPAKISWAHVWGQFCLCYDGQKLVTEKDNLRNYGIKDGDQLRFIRHVTNNCCVQRKRLKKRVVYLKQHRRCRSSQVDGYQPKGNCDDDEIGSDDEATDNGKIKHHIEEEEEEEREEECVGKNKLAGFLGELFSYTPLAVVRRTRTKSKIWPTTMPKCILGSFRKIRSIVCFGRKRHYSRRLPWRPH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g02015 277 Pfam Ubiquitin-like domain 52 138 IPR040610 -
Gma17g02015 277 CDD Ubl_SNRNP25 52 137 IPR040610 -
Gma17g02015 277 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 1 274 IPR039690 GO:0000398|GO:0005689
Gma17g02015 277 MobiDBLite consensus disorder prediction 1 26 - -
Gma17g02015 277 PANTHER - 1 274 - -
Gma17g02015 277 SUPERFAMILY Ubiquitin-like 47 143 IPR029071 -
Gma17g02015 277 Gene3D - 47 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g02015 Gma-Chr17 36114035 36117586 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g02015 - - gmx:100820296 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02015 17 36114035 36117586 Gma17g02015 17 36114035 36117586 ECH
Gma14g01092 14 14596681 14599551 Gma17g02015 17 36114035 36117586 ECH
Gma17g02015 17 36114035 36117586 Gma14g01092 14 14596681 14599551 GST
Gma17g02015 17 36114035 36117586 Gma04g00612 04 5593624 5595500 PCT
Gma17g02015 17 36114035 36117586 Gma06g00597 06 5403735 5406160 PCT
Gma04g00612 04 5593624 5595500 Gma17g02015 17 36114035 36117586 PCT
Gma06g00597 06 5403735 5406160 Gma17g02015 17 36114035 36117586 PCT