Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00612 ATGGGTGAGAGAAGGTTGATGATTGTTTCTCACGAAATCCCTCAGCGATCTCTCAGCATGCACTACGTAGATACCAGTTTTTTCAACGATAGGTTTCATTCCGAAACGCTCATCCTCTCCATCCTCAAATTGGATGCCTCTTCCTTCCATGTTGAAGTTGCAAATGCAGCAACTGTTGCAGAACTTAAGCAAGCGGTGGAGGCAGTTTTCTGTCGCGTGCCTCAGAAGGGACCGGGAAAAATATTATGGCCACTTGTCTGGCGACAATTCTGCTTAAGCTATCAAGGACAGAAATTAGTCTCGGAATCGGATTATATTAGAGATTTTGGCATCGAGGATGGTGACCAGCTTCATTTCGTGCACCATGTATCTGACACTTGCAGTTTCGAGGGAAAGCAGTCCAAGAAACAAGCTGTCAATTTGAAACAACACAGGAGGTGCAGGTCATCGTCAAAAGTCAATAGATATCAACAGAAAGAACATAACGATGACAACGACATTGGTTTGCATGATATAGTCATAGAGAATGCGAAGATCCGGAATTGCAATAATGCAGAAGAAAATGGAGGAAAGCTAAGCTTACCTGGCTTTTTGGGAGGGTTGTTCTCACACAGCCGGCTGGCAGTTGTGAGCAGAGCTAGAATTGAGGGCAGGATTTGCTGCTCAATGATGCTTAGATGTATAGTGAGCAATTTTAGAAAAATTACAAGAATTTTACGCTATTGCAGAAGGCAGCATTACTCTCGGAGACCCACATGGAGAGAATATTGA 771 0.4358 MGERRLMIVSHEIPQRSLSMHYVDTSFFNDRFHSETLILSILKLDASSFHVEVANAATVAELKQAVEAVFCRVPQKGPGKILWPLVWRQFCLSYQGQKLVSESDYIRDFGIEDGDQLHFVHHVSDTCSFEGKQSKKQAVNLKQHRRCRSSSKVNRYQQKEHNDDNDIGLHDIVIENAKIRNCNNAEENGGKLSLPGFLGGLFSHSRLAVVSRARIEGRICCSMMLRCIVSNFRKITRILRYCRRQHYSRRPTWREY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00612 256 SUPERFAMILY Ubiquitin-like 34 125 IPR029071 -
Gma04g00612 256 Pfam Ubiquitin-like domain 39 123 IPR040610 -
Gma04g00612 256 CDD Ubl_SNRNP25 37 122 IPR040610 -
Gma04g00612 256 Gene3D - 32 130 - -
Gma04g00612 256 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 3 248 IPR039690 GO:0000398|GO:0005689
Gma04g00612 256 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 3 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00612 Gma-Chr4 5593624 5595500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00612 - - gmx:100781177 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00612 04 5593624 5595500 Gma04g00612 04 5593624 5595500 ECH
Gma04g00612 04 5593624 5595500 Gma06g00597 06 5403735 5406160 ECH
Gma04g00612 04 5593624 5595500 Gma06g00597 06 5403735 5406160 GST
Gma17g02015 17 36114035 36117586 Gma04g00612 04 5593624 5595500 PCT
Gma14g01092 14 14596681 14599551 Gma04g00612 04 5593624 5595500 PCT
Gma04g00612 04 5593624 5595500 Gma17g02015 17 36114035 36117586 PCT
Gma04g00612 04 5593624 5595500 Gma14g01092 14 14596681 14599551 PCT