Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01092 ATGGCCACCACCGAGCACGAAAAACAGTTAATAGTGGCCAACCCTAACCCTAACCCTAACACCAAGACCCCTCGCCGATCCTCCTCCTCCTCCTCCTCGCTCGCCATTTTCGCGAGGAAAAGCTTCTTCTACGACAGGCTCCCCTCCCAACCCCTCAGACTCACCGTCCTCAAACTCGACGGTTCATGCTTCCATATTCAAGTTTCGAAGATGGCCACCGTTGCGGAACTGAAGGACGCGGTGGAGGCCGTGTTTAGTCACGTGCCTCACAAGGGGCCAGCAAAAATTTCATGGGCGCATGTTTGGGGGCAATTTTGTTTATGCTATGATGGACAGAAGCTAGTTACGGAGAAGGATTATCTTCGAAATTATGGCATCAAGGATGGTGACCAGCTCCGTTTCATCCGCCATGTCACAAACAATTGCTGTGTTCAAAGAAAGCGGTTGAAGAAAAGAGTTGTCTATTTGAAACAACACAGGAGGTGCAGGTCATTGCAAGTGGATGGCCATCTACCGAAAGGAAATTGTGATGATAATGACATTGGTTCTGATGATGAAGCCACAGATAGTGGGAAGATCAAGCACCATATTGAAGAAGAGGAAGAAGAAGAAGAAAGGGAAGAAGAGTGCGTTGGAAAGAACAAATTAGCTGGCTTTTTGGGAGACTTGTTCTCATACACTCCACTAGCAGTTGTGAGAAGAACTAGAACTAAAAGCAGGATTTGGCCAACCACTATGCCCAAATGTTTACTTGGTAGTCTTCGAAAGATTAGAAGTATCGTATGCTTTGGCAGGAGGAGGCACTATTCTCGGAGACTTCCATGGAGACCGCATTAA 837 0.4719 MATTEHEKQLIVANPNPNPNTKTPRRSSSSSSSLAIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKMATVAELKDAVEAVFSHVPHKGPAKISWAHVWGQFCLCYDGQKLVTEKDYLRNYGIKDGDQLRFIRHVTNNCCVQRKRLKKRVVYLKQHRRCRSLQVDGHLPKGNCDDNDIGSDDEATDSGKIKHHIEEEEEEEEREEECVGKNKLAGFLGDLFSYTPLAVVRRTRTKSRIWPTTMPKCLLGSLRKIRSIVCFGRRRHYSRRLPWRPH 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01092 278 SUPERFAMILY Ubiquitin-like 47 143 IPR029071 -
Gma14g01092 278 PANTHER - 3 275 - -
Gma14g01092 278 CDD Ubl_SNRNP25 52 137 IPR040610 -
Gma14g01092 278 Pfam Ubiquitin-like domain 52 138 IPR040610 -
Gma14g01092 278 MobiDBLite consensus disorder prediction 1 31 - -
Gma14g01092 278 Gene3D - 47 145 - -
Gma14g01092 278 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 3 275 IPR039690 GO:0000398|GO:0005689
Gma14g01092 278 MobiDBLite consensus disorder prediction 173 200 - -
Gma14g01092 278 MobiDBLite consensus disorder prediction 9 31 - -
Gma14g01092 278 MobiDBLite consensus disorder prediction 173 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01092 Gma-Chr14 14596681 14599551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01092 - - gmx:100819176 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01092 14 14596681 14599551 Gma14g01092 14 14596681 14599551 ECH
Gma14g01092 14 14596681 14599551 Gma17g02015 17 36114035 36117586 ECH
Gma17g02015 17 36114035 36117586 Gma14g01092 14 14596681 14599551 GST
Gma14g01092 14 14596681 14599551 Gma04g00612 04 5593624 5595500 PCT
Gma14g01092 14 14596681 14599551 Gma06g00597 06 5403735 5406160 PCT
Gma04g00612 04 5593624 5595500 Gma14g01092 14 14596681 14599551 PCT
Gma06g00597 06 5403735 5406160 Gma14g01092 14 14596681 14599551 PCT