Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01950 ATGGGTTCTTGCAACAAACCCCAACAACAACAACAACAACATGTTCAAGGCCCTATTATCATAGGAGCTGGTCCTTCAGGCTTAGCCGTGGCTGCGTGTCTCTCAGAACACAAAGTTCCTTTCGTAATTCTTGAGAGACACAACTGCATAGCCTCCCTTTGGCAAAACAAAACCTACGACCGTCTCAAACTCCACCTCCCTAAACAGTTCTGCGAGCTTCCCTTAAAGGGTTTTCCCCACACTTTCCCAAAATACCCCACAAAGTACCAGTTCATATCCTACATGGAGTCCTACGCTTCACACTTCAACATTCACCCTATCTTCAACCAAACCGTGGAAAGTGCTGACTTTGATAAAGGGTCGAAGGTTTGGGTGGTTAAAACTCAAGAGGTTGATTATTCTTCTCGCTGGCTTGTGGTGGCTACTGGTGAAAATGCTGAACCTGTTGTGCCTAGGATTCATGGGATGGAGCTTTTTAATGGTGATGTTGCTCACACTAGCGTGTATAAGTCTGGCTCTGAGTATAGGAACAAGAAGGTTTTGGTCATTGGGTGTGGTAATTCGGGAATGGAAGTTTGCTTGGACCTTTGTAGACACAATGCCAAACCTTACATGGTTGCTAGAAATACAGTACATGTGCTTCCTAGAGAGATGTTTGGCTTCTCAACATTTGGGGTTGCTATGGCGCTCTATAAGTGGTTTCCCATTAAGTTAGTAGACAAGATCATCTTGCTTGCAACAAACTTCATTTTGGGCAACACCAATCACTATGGCATCAAGAGGCCCAAAACCGGCCCAATAGAGCTCAAACTCGCCACAGGGAAAACCCCAGTCCTTGATGTTGGTCAAGTTGCACAAATAAAATGTGGTAACATAAAGGTGATGGAGGGTGTGAAGGAGATAACAAGAAATGGTGCCAAATTTATGGATGGACAAGAAAAGGAATTCGATGCTATAATCTTGGCAACAGGATACAAGAGCAACGTGCCTACTTGGCTCAAGGGATGTGATTTTTTCACGGAAGATGGAATGCCCAAAACACCCTTTCCTCATGGGTGGAAAGGAGAGCAGGGATTGTATACGGTGGGGTTCACAAGAAGAGGTCTTCAAGGAACGTCGTGTGATGCAATCAAGATCGCTGAAGACATAGCTGAACAGTGGAGAACCGTAGAGGACAAGAGTCACTGCGATTCACATATCATCCTACTCAATAATTCATAG 1221 0.4472 MGSCNKPQQQQQQHVQGPIIIGAGPSGLAVAACLSEHKVPFVILERHNCIASLWQNKTYDRLKLHLPKQFCELPLKGFPHTFPKYPTKYQFISYMESYASHFNIHPIFNQTVESADFDKGSKVWVVKTQEVDYSSRWLVVATGENAEPVVPRIHGMELFNGDVAHTSVYKSGSEYRNKKVLVIGCGNSGMEVCLDLCRHNAKPYMVARNTVHVLPREMFGFSTFGVAMALYKWFPIKLVDKIILLATNFILGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQVAQIKCGNIKVMEGVKEITRNGAKFMDGQEKEFDAIILATGYKSNVPTWLKGCDFFTEDGMPKTPFPHGWKGEQGLYTVGFTRRGLQGTSCDAIKIAEDIAEQWRTVEDKSHCDSHIILLNNS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01950 406 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 12 397 - -
Gma17g01950 406 Pfam Pyridine nucleotide-disulphide oxidoreductase 19 210 - -
Gma17g01950 406 PRINTS FAD-dependent pyridine nucleotide reductase signature 18 37 - -
Gma17g01950 406 PRINTS FAD-dependent pyridine nucleotide reductase signature 179 197 - -
Gma17g01950 406 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 12 397 - -
Gma17g01950 406 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Gma17g01950 406 SUPERFAMILY FAD/NAD(P)-binding domain 178 388 IPR036188 -
Gma17g01950 406 Gene3D - 6 390 IPR036188 -
Gma17g01950 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 17 39 - -
Gma17g01950 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 136 144 - -
Gma17g01950 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 175 199 - -
Gma17g01950 406 SUPERFAMILY FAD/NAD(P)-binding domain 19 211 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01950 Gma-Chr17 34718372 34720909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01950 K11816 - gmx:100798781 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01950 17 34718372 34720909 Gma14g01136 14 17321654 17324267 GST
Gma17g01950 17 34718372 34720909 Gma04g00646 04 5950767 5953467 PCT
Gma17g01950 17 34718372 34720909 Gma06g00639 06 5767741 5770468 PCT
Gma04g00646 04 5950767 5953467 Gma17g01950 17 34718372 34720909 PCT
Gma06g00639 06 5767741 5770468 Gma17g01950 17 34718372 34720909 PCT